CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	86.35	86.08
TraesCS3A01G153500.1	Wheat	peroxisome	86.03	85.22
TraesCS3D01G160800.1	Wheat	cytosol	85.4	84.59
TraesCS4B01G324200.1	Wheat	peroxisome	82.86	82.59
Os01t0228600-01	Rice	extracellular	82.54	82.28
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	80.95	80.7
Zm00001d030544_P001	Maize	cytosol, extracellular	75.56	74.38
GSMUA_Achr3P03420_001	Banana	cytosol	73.97	73.73
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	71.43	71.89
VIT_09s0002g04300.t01	Wine grape	cytosol	69.52	69.97
KRH47286	Soybean	nucleus	68.25	68.69
PGSC0003DMT400019584	Potato	cytosol	67.94	68.37
CDX79406	Canola	cytosol	67.3	67.73
Solyc12g044260.1.1	Tomato	cytosol	66.98	67.41
CDX87280	Canola	cytosol	65.71	66.77
Bra035206.1-P	Field mustard	cytosol	65.71	66.77
Bra003537.1-P	Field mustard	cytosol	66.35	66.77
AT1G79870.1	Thale cress	cytosol	66.35	66.77
CDX67931	Canola	cytosol	66.35	66.77
GSMUA_Achr3P31530_001	Banana	cytosol	66.03	65.82
CDY58781	Canola	cytosol	64.76	65.18
KRH44352	Soybean	peroxisome	30.79	63.4
Solyc12g044250.1.1	Tomato	vacuole	62.86	62.86
PGSC0003DMT400019586	Potato	extracellular	62.54	62.54
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	59.05	59.42
Solyc03g120680.2.1	Tomato	nucleus	58.41	59.16
KRH09880	Soybean	cytosol	55.56	57.76
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	86.35	55.97
OQU81061	Sorghum	plastid	50.16	49.53
EES11740	Sorghum	mitochondrion	50.48	48.18
OQU88433	Sorghum	cytosol	48.89	47.98
EES11738	Sorghum	cytosol	51.11	47.63
EES10352	Sorghum	cytosol, mitochondrion	48.25	44.97
OQU81058	Sorghum	cytosol	47.3	44.48
EES10400	Sorghum	cytosol	47.3	44.08
KXG29243	Sorghum	cytosol	30.79	25.46
EES07384	Sorghum	mitochondrion	23.17	19.01
EER89775	Sorghum	mitochondrion	22.54	18.88
KXG34859	Sorghum	mitochondrion, plastid	22.54	18.49
EER96197	Sorghum	mitochondrion	21.9	17.92
EER90146	Sorghum	mitochondrion, plastid	29.52	15.17
EES15079	Sorghum	plastid	28.89	14.7
EES12983	Sorghum	plastid	28.57	14.52

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1B6Q0U1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009854	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287	GO:GO:0055114
EnsemblPlants:KXG31500	ProteinID:KXG31500	ProteinID:KXG31500.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
PANTHER:PTHR10996	PANTHER:PTHR10996:SF139	EnsemblPlantsGene:SORBI_3003G008900	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0003C64B1F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:805133..808815

Molecular Weight (calculated)

34229.2 Da

IEP (calculated)

5.690

GRAVY (calculated)

0.077

Length

315 amino acids

Sequence
(BLAST)

001: MESLGVLLLH PVNAYLEQEL DRRCRLYRFW ESPREEFLRA HAGAVRAVVG NANYGADAAL IDALPALEIV ASFSVGIDRV DLAKCRERGI RVTNTPDVLT
101: DDVADLAVGL AIAVLRRIPQ ADRYVRAGLW KSRGDYTLTT RFSGKRVGII GLGRIGQAVA RRVEAFDCPV SYYQRTEQAS VYPNYTYYPS VVELASNSDV
201: LVVACPLNAS TRHIVSREVM EALGPKGVLI NIGRGPHVDE PEMVAALADG RLGGAGLDVF EDEPNVPEAL LAMDNVVLVP HVGSGTYETR KAMADLVLGN
301: LEAHVLSKPL LTPVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.