CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004451_P001	Maize	cytosol	86.39	86.65
HORVU2Hr1G005210.2	Barley	mitochondrion	61.54	75.09
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	73.08	73.95
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	72.49	73.35
TraesCS2A01G035400.1	Wheat	mitochondrion	70.41	72.12
TraesCS2D01G034600.1	Wheat	mitochondrion	70.12	71.82
EES11738	Sorghum	cytosol	70.71	70.71
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	68.64	70.52
TraesCS2B01G048500.1	Wheat	cytosol	69.53	69.73
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	69.82	68.8
OQU81058	Sorghum	cytosol	67.75	68.36
EES10352	Sorghum	cytosol, mitochondrion	67.75	67.75
EES11740	Sorghum	mitochondrion	65.68	67.27
HORVU4Hr1G086940.2	Barley	cytosol	25.44	66.67
GSMUA_Achr4P17980_001	Banana	cytosol	18.93	59.81
GSMUA_Achr5P14420_001	Banana	cytosol	56.51	57.88
GSMUA_Achr5P14430_001	Banana	mitochondrion	50.89	56.58
PGSC0003DMT400058518	Potato	cytosol	21.89	53.24
Solyc08g080030.2.1	Tomato	cytosol	42.01	52.59
OQU81061	Sorghum	plastid	48.22	51.1
CDY54697	Canola	mitochondrion	22.19	50.68
AT2G45630.2	Thale cress	plastid	50.0	50.0
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	42.6	49.66
PGSC0003DMT400058520	Potato	cytosol	47.34	49.23
OQU88433	Sorghum	cytosol	46.45	48.91
VIT_02s0025g04730.t01	Wine grape	cytosol	45.56	48.58
Bra026966.1-P	Field mustard	cytosol	34.32	48.54
CDY57070	Canola	cytosol	46.15	48.45
CDY26572	Canola	cytosol	34.32	48.13
CDY17092	Canola	cytosol	15.09	48.11
KXG31500	Sorghum	cytosol	44.08	47.3
Solyc01g093990.2.1	Tomato	cytosol	44.38	46.44
CDX98054	Canola	cytosol	46.45	45.51
Bra019774.1-P	Field mustard	cytosol	46.45	45.51
CDY16011	Canola	cytosol, peroxisome, plastid	39.65	45.27
Bra035498.1-P	Field mustard	cytosol	13.02	44.9
KRH48313	Soybean	cytosol	43.79	44.05
KRH48312	Soybean	cytosol	43.49	43.62
KRH48311	Soybean	cytosol	42.9	43.41
KRH48310	Soybean	cytosol	40.83	41.32
CDY26571	Canola	plastid	36.09	41.22
CDY16012	Canola	cytosol, nucleus, peroxisome	29.29	41.08
KRH65202	Soybean	cytosol	26.63	40.0
KRH65201	Soybean	plastid	32.25	37.98
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	49.11	36.01
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	36.69	31.23
CDY16010	Canola	cytosol, nucleus, plastid	45.56	27.95
CDY26570	Canola	cytosol	32.54	24.44
KXG29243	Sorghum	cytosol	24.85	22.05
EER89775	Sorghum	mitochondrion	23.37	21.01
EES07384	Sorghum	mitochondrion	22.49	19.79
KXG34859	Sorghum	mitochondrion, plastid	21.3	18.75
EER96197	Sorghum	mitochondrion	20.12	17.66
EES15079	Sorghum	plastid	26.04	14.22
EES12983	Sorghum	plastid	26.04	14.19
EER90146	Sorghum	mitochondrion, plastid	25.74	14.19

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EntrezGene:8080292	UniProt:C5YC45	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd
EnsemblPlants:EES10400	ProteinID:EES10400	ProteinID:EES10400.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267
GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996
PANTHER:PTHR10996:SF179	EnsemblPlantsGene:SORBI_3006G014000	SUPFAM:SSF51735	SUPFAM:SSF52283	unigene:Sbi.17185	UniParc:UPI0001A86C92
RefSeq:XP_002446072.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:1950491..1953090

Molecular Weight (calculated)

35773.3 Da

IEP (calculated)

6.716

GRAVY (calculated)

0.284

Length

338 amino acids

Sequence
(BLAST)

001: MMASGGEPPA TKVVLLLVPH MDASFHAALR GRFRVLDFFA SSERSPLPAF LAAAAAAPEP PRAAIVVGAG LIPVDAAFLD AVPSLRCVTC LAAGVDFIDL
101: DECARRGVVV ANSGRVFSAD VADHAVGLLI DVLRRVSAAE RFVRRGLWRV QGDGYPLGSK IGGRRVGIVG LGNIGSQIAK RLQALGCTVF YNSRTRKDSV
201: PYRYFTSVHD LAAESDVLVV ACALNKATRH IVGKDVLEAL GKDGVIVNIS RGANVDQAEL VRALQEGRIA GAGLDVFENE PGAPGELFSM DNVVMTPHVA
301: VFTAESMSDL RDHTIANLEA FFSGEPLLTP VLPHSPVM

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.