CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	73.67	74.55
TraesCS2D01G034600.1	Wheat	mitochondrion	72.78	74.55
TraesCS2A01G035400.1	Wheat	mitochondrion	72.49	74.24
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	72.49	73.35
HORVU2Hr1G005210.2	Barley	mitochondrion	59.76	72.92
OQU81058	Sorghum	cytosol	72.19	72.84
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	70.41	72.34
EES10352	Sorghum	cytosol, mitochondrion	71.89	71.89
TraesCS2B01G048500.1	Wheat	cytosol	71.3	71.51
EES10400	Sorghum	cytosol	70.71	70.71
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	70.41	69.39
EES11740	Sorghum	mitochondrion	63.61	65.15
HORVU4Hr1G086940.2	Barley	cytosol	24.26	63.57
GSMUA_Achr4P17980_001	Banana	cytosol	18.05	57.01
GSMUA_Achr5P14420_001	Banana	cytosol	55.62	56.97
GSMUA_Achr5P14430_001	Banana	mitochondrion	51.18	56.91
PGSC0003DMT400058518	Potato	cytosol	21.3	51.8
Solyc08g080030.2.1	Tomato	cytosol	41.12	51.48
KXG31500	Sorghum	cytosol	47.63	51.11
Bra026966.1-P	Field mustard	cytosol	36.09	51.05
CDY26572	Canola	cytosol	36.39	51.04
CDY54697	Canola	mitochondrion	21.89	50.0
CDY57070	Canola	cytosol	47.34	49.69
OQU88433	Sorghum	cytosol	47.04	49.53
AT2G45630.2	Thale cress	plastid	49.41	49.41
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	41.72	48.62
PGSC0003DMT400058520	Potato	cytosol	46.75	48.62
OQU81061	Sorghum	plastid	45.56	48.28
VIT_02s0025g04730.t01	Wine grape	cytosol	44.97	47.95
Bra019774.1-P	Field mustard	cytosol	47.63	46.67
CDX98054	Canola	cytosol	47.63	46.67
CDY17092	Canola	cytosol	14.5	46.23
Solyc01g093990.2.1	Tomato	cytosol	44.08	46.13
CDY16011	Canola	cytosol, peroxisome, plastid	40.24	45.95
KRH48312	Soybean	cytosol	44.97	45.1
KRH48311	Soybean	cytosol	44.38	44.91
Bra035498.1-P	Field mustard	cytosol	13.02	44.9
KRH48313	Soybean	cytosol	43.79	44.05
CDY16012	Canola	cytosol, nucleus, peroxisome	31.36	43.98
CDY26571	Canola	plastid	37.57	42.91
KRH48310	Soybean	cytosol	42.31	42.81
KRH65201	Soybean	plastid	33.43	39.37
KRH65202	Soybean	cytosol	26.04	39.11
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.0	36.66
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	36.98	31.49
CDY16010	Canola	cytosol, nucleus, plastid	47.34	29.04
CDY26570	Canola	cytosol	33.73	25.33
KXG29243	Sorghum	cytosol	25.15	22.31
EER89775	Sorghum	mitochondrion	23.37	21.01
EES07384	Sorghum	mitochondrion	22.78	20.05
KXG34859	Sorghum	mitochondrion, plastid	21.89	19.27
EER96197	Sorghum	mitochondrion	21.3	18.7
EER90146	Sorghum	mitochondrion, plastid	26.63	14.68
EES15079	Sorghum	plastid	26.63	14.54
EES12983	Sorghum	plastid	26.04	14.19

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EntrezGene:8057341	UniProt:C5YBL0	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1
InterPro:D-isomer_DH_NAD-bd	EnsemblPlants:EES11738	ProteinID:EES11738	ProteinID:EES11738.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618
GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	EnsemblPlantsGene:SORBI_3006G004900	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI0001A8714B	RefSeq:XP_002447410.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:798031..800128

Molecular Weight (calculated)

35841.2 Da

IEP (calculated)

6.420

GRAVY (calculated)

0.243

Length

338 amino acids

Sequence
(BLAST)

001: MASDAVAATA GEEPLALPAL LLIRRVDAPF AAALHQRFRV LDFFASGSPP LKAFLAAAAA IQEPPRAAVV MGGGGPARVD AEFLDALPSL RCVVSTAAGI
101: DHIDLHECAR RGVAVANSGS VYSADVADHA VCMLIDVLRR VTASQRFVRR GLWALHGDYY CLGSKLGGKR VGIIGLGNIG SLIAKRLEAF GCVISYHSRK
201: PKDLVSYNYF SNVQELASES DVLVVACALN KQTSHIVNND VLDALGKNGV VINIGRGANV EEAEMVRALK EGRIAGAGLD VFEDEPNVPP ELLAMDNVVV
301: TPHVAVFTSE SRSDLRDHTI ANLEAFFAGK QLLTPVLP

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.