CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88433	Sorghum	cytosol	76.8	76.32
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	71.79	72.47
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	71.47	72.15
Os04t0107500-01	Rice	plasma membrane	70.85	71.52
TraesCS2D01G030900.1	Wheat	cytosol	68.34	68.99
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	67.4	67.4
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	68.97	65.67
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	67.71	60.5
Bra035498.1-P	Field mustard	cytosol	17.24	56.12
GSMUA_Achr4P17980_001	Banana	cytosol	18.81	56.07
CDY17092	Canola	cytosol	18.5	55.66
CDY54697	Canola	mitochondrion	25.71	55.41
PGSC0003DMT400058518	Potato	cytosol	23.51	53.96
EES11740	Sorghum	mitochondrion	54.55	52.73
Solyc08g080030.2.1	Tomato	cytosol	44.51	52.59
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	47.02	51.72
GSMUA_Achr5P14420_001	Banana	cytosol	52.66	50.91
CDY57070	Canola	cytosol	51.1	50.62
KXG31500	Sorghum	cytosol	49.53	50.16
GSMUA_Achr5P14430_001	Banana	mitochondrion	47.34	49.67
EES10400	Sorghum	cytosol	51.1	48.22
CDY26572	Canola	cytosol	36.36	48.13
Bra026966.1-P	Field mustard	cytosol	36.05	48.12
CDY16011	Canola	cytosol, peroxisome, plastid	44.51	47.97
Bra019774.1-P	Field mustard	cytosol	51.72	47.83
CDX98054	Canola	cytosol	51.72	47.83
PGSC0003DMT400058520	Potato	cytosol	48.28	47.38
VIT_02s0025g04730.t01	Wine grape	cytosol	46.71	47.0
OQU81058	Sorghum	cytosol	48.9	46.57
AT2G45630.2	Thale cress	plastid	48.9	46.15
EES11738	Sorghum	cytosol	48.28	45.56
EES10352	Sorghum	cytosol, mitochondrion	48.28	45.56
KRH48313	Soybean	cytosol	46.71	44.35
KRH48311	Soybean	cytosol	46.4	44.31
KRH48312	Soybean	cytosol	46.4	43.92
Solyc01g093990.2.1	Tomato	cytosol	44.2	43.65
CDY26571	Canola	plastid	39.19	42.23
KRH48310	Soybean	cytosol	43.89	41.92
CDY16012	Canola	cytosol, nucleus, peroxisome	31.35	41.49
KRH65202	Soybean	cytosol	28.84	40.89
KRH65201	Soybean	plastid	35.42	39.37
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	51.41	35.57
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	42.63	34.26
CDY16010	Canola	cytosol, nucleus, plastid	49.53	28.68
CDY26570	Canola	cytosol	35.11	24.89
EES07384	Sorghum	mitochondrion	28.21	23.44
EER89775	Sorghum	mitochondrion	25.71	21.81
KXG29243	Sorghum	cytosol	24.76	20.73
KXG34859	Sorghum	mitochondrion, plastid	23.2	19.27
EER96197	Sorghum	mitochondrion	22.57	18.7
EER90146	Sorghum	mitochondrion, plastid	30.09	15.66
EES12983	Sorghum	plastid	29.15	15.0
EES15079	Sorghum	plastid	27.9	14.38

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1B6PJC5	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	ProteinID:KXG25763.1	InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU81061
ProteinID:OQU81061	ProteinID:OQU81061.1	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF147
EnsemblPlantsGene:SORBI_3006G005300	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0001C80582	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:827017..829425

Molecular Weight (calculated)

33251.2 Da

IEP (calculated)

5.425

GRAVY (calculated)

0.321

Length

319 amino acids

Sequence
(BLAST)

001: MTPAAAGAGA KPLVLLSQPS DSGLTPVMEG QFRFVLAADA DAATAAEARV LFVPGLRPVT ADLIDRLPAL ELVAAISVGL DHVDLDACRR RGITVTNAGT
101: TFSVDIADYA VGLVVAVLRK VAAADAHLRR GRWAMDGDYP LATKVSGKRV GIVGLGSIGS LVARRLAAFG CAVAYHSRTR KPPPCPYTFY PTVRALAADS
201: DVLVLACALT EETRRAVDRE VMEALGRGGG VLVNVGRGAL VDEPELVRCL RDGVIGGAGL DVFENEPDVP AELFDMDNVV LSSHKAVATT ESIRGVLDTV
301: SGNLEAFFAG KPLLSPVAL

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.