Factsheet for TraesCS2A01G028600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
extracellular 2
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G030900.1	Wheat	cytosol	90.15	95.57
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	73.73	78.16
Zm00001d018790_P001	Maize	extracellular, plasma membrane	69.25	74.12
Os04t0107500-01	Rice	plasma membrane	69.85	74.05
OQU88433	Sorghum	cytosol	68.36	71.34
OQU81061	Sorghum	plastid	65.67	68.97
GSMUA_Achr4P17980_001	Banana	cytosol	18.51	57.94
CDY54697	Canola	mitochondrion	25.07	56.76
CDY17092	Canola	cytosol	17.91	56.6
Bra035498.1-P	Field mustard	cytosol	16.12	55.1
PGSC0003DMT400058518	Potato	cytosol	22.09	53.24
TraesCS2A01G034900.1	Wheat	mitochondrion	51.34	53.09
TraesCS2A01G035400.1	Wheat	mitochondrion	51.34	52.12
CDY57070	Canola	cytosol	49.85	51.86
GSMUA_Achr5P14420_001	Banana	cytosol	51.04	51.82
Solyc08g080030.2.1	Tomato	cytosol	41.19	51.11
Bra026966.1-P	Field mustard	cytosol	36.42	51.05
GSMUA_Achr5P14430_001	Banana	mitochondrion	46.27	50.99
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	50.75	50.9
CDY26572	Canola	cytosol	36.42	50.62
TraesCS7A01G538500.1	Wheat	cytosol	51.64	50.29
CDX98054	Canola	cytosol	50.45	48.99
Bra019774.1-P	Field mustard	cytosol	50.45	48.99
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	42.09	48.62
VIT_02s0025g04730.t01	Wine grape	cytosol	45.67	48.27
CDY16011	Canola	cytosol, peroxisome, plastid	41.79	47.3
PGSC0003DMT400058520	Potato	cytosol	45.67	47.08
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	49.85	46.13
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	43.28	45.89
KRH48313	Soybean	cytosol	45.67	45.54
KRH48312	Soybean	cytosol	45.67	45.4
TraesCS3A01G153500.1	Wheat	peroxisome	42.39	44.65
AT2G45630.2	Thale cress	plastid	44.48	44.08
CDY16012	Canola	cytosol, nucleus, peroxisome	31.04	43.15
KRH48311	Soybean	cytosol	42.99	43.11
Solyc01g093990.2.1	Tomato	cytosol	41.19	42.72
KRH65202	Soybean	cytosol	28.36	42.22
CDY26571	Canola	plastid	37.01	41.89
KRH48310	Soybean	cytosol	40.6	40.72
KRH65201	Soybean	plastid	33.13	38.68
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	41.19	34.76
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	45.97	33.41
CDY16010	Canola	cytosol, nucleus, plastid	48.06	29.22
CDY26570	Canola	cytosol	34.03	25.33
TraesCS7A01G232200.1	Wheat	golgi	22.99	20.42
TraesCS6A01G000400.1	Wheat	peroxisome	22.99	19.95
TraesCS5A01G161300.1	Wheat	plastid	20.3	17.99
TraesCS7A01G496500.1	Wheat	plastid	28.96	15.85
TraesCS6A01G274900.1	Wheat	mitochondrion	17.31	15.38
TraesCS2A01G508900.1	Wheat	plastid	27.16	14.77
TraesCS3A01G146800.1	Wheat	plastid	26.57	14.35
TraesCS1A01G221000.1	Wheat	plastid	22.99	13.21

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
PANTHER:PTHR10996	PANTHER:PTHR10996:SF147	SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2A01G028600	EnsemblPlants:TraesCS2A01G028600.1
TIGR:cd12156	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:13010050..13011750

Molecular Weight (calculated)

34523.8 Da

IEP (calculated)

5.958

GRAVY (calculated)

0.353

Length

335 amino acids

Sequence
(BLAST)

001: MAAPPPADKR PLVMLAQPLF PEFAAALAGR YRFALLADAD AAAAAEARAL LVGGLPRFTS QHLGALPALQ LGGLPPVTAQ HLGALPALEL VACTSVGVDH
101: VDLDACRSRG LSVTNAGAAF AADSADYAVG LLVAVLRRVA AADAYVRSGR WTADGDYPLA SKVSGKRVGI VGLGNIGSRV ARRLAAFGCA VSYHSRSPKP
201: SAPYPFVPAL RDLAAGSDVL VLSCALTDET KHMVNRDVME ALGKGGVLVN VGRGGLVDEP ELVRCLTEGV IGGAGLDVYE NEPAVPPELL AMDNVVLSDH
301: RAVLTTESIG GVLQVVIANL DAFYSGRPLV SPVEL

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.