Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G160800.1 | Wheat | cytosol | 98.43 | 98.43 |
| TraesCS3B01G180100.1 | Wheat | cytosol, golgi, unclear | 97.48 | 98.1 |
| TraesCS5A01G496700.1 | Wheat | cytosol, peroxisome, plastid | 89.94 | 90.51 |
| KXG31500 | Sorghum | cytosol | 85.22 | 86.03 |
| Os01t0228600-01 | Rice | extracellular | 82.39 | 82.91 |
| GSMUA_Achr3P03420_001 | Banana | cytosol | 74.53 | 75.0 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 75.16 | 74.69 |
| Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 72.01 | 73.16 |
| KRH47286 | Soybean | nucleus | 70.13 | 71.25 |
| VIT_09s0002g04300.t01 | Wine grape | cytosol | 69.81 | 70.93 |
| AT1G79870.1 | Thale cress | cytosol | 68.87 | 69.97 |
| PGSC0003DMT400019584 | Potato | cytosol | 68.55 | 69.65 |
| CDX79406 | Canola | cytosol | 68.24 | 69.33 |
| Solyc12g044260.1.1 | Tomato | cytosol | 67.92 | 69.01 |
| CDX87280 | Canola | cytosol | 66.98 | 68.71 |
| Bra035206.1-P | Field mustard | cytosol | 66.98 | 68.71 |
| Bra003537.1-P | Field mustard | cytosol | 67.61 | 68.69 |
| CDX67931 | Canola | cytosol | 67.61 | 68.69 |
| GSMUA_Achr3P31530_001 | Banana | cytosol | 67.3 | 67.72 |
| KRH44352 | Soybean | peroxisome | 32.39 | 67.32 |
| Solyc12g044250.1.1 | Tomato | vacuole | 66.67 | 67.3 |
| CDY58781 | Canola | cytosol | 66.04 | 67.09 |
| PGSC0003DMT400019586 | Potato | extracellular | 64.78 | 65.4 |
| HORVU3Hr1G031200.3 | Barley | cytosol, mitochondrion | 97.17 | 63.58 |
| Solyc03g120680.2.1 | Tomato | nucleus | 59.75 | 61.09 |
| VIT_09s0002g04290.t01 | Wine grape | cytosol, plastid | 59.43 | 60.38 |
| KRH09880 | Soybean | cytosol | 56.92 | 59.74 |
| TraesCS2A01G035400.1 | Wheat | mitochondrion | 50.0 | 48.18 |
| TraesCS2A01G034900.1 | Wheat | mitochondrion | 48.74 | 47.84 |
| TraesCS2A01G035500.1 | Wheat | extracellular, mitochondrion | 50.0 | 47.6 |
| TraesCS2A01G034800.1 | Wheat | cytosol, plasma membrane, plastid | 46.86 | 47.15 |
| TraesCS7A01G538500.1 | Wheat | cytosol | 48.11 | 44.48 |
| TraesCS2A01G028600.1 | Wheat | extracellular, plasma membrane | 44.65 | 42.39 |
| TraesCS2A01G035000.2 | Wheat | mitochondrion, plastid | 46.23 | 40.61 |
| TraesCS6A01G000400.1 | Wheat | peroxisome | 29.56 | 24.35 |
| TraesCS5A01G161300.1 | Wheat | plastid | 23.27 | 19.58 |
| TraesCS7A01G232200.1 | Wheat | golgi | 22.01 | 18.57 |
| TraesCS7A01G496500.1 | Wheat | plastid | 28.93 | 15.03 |
| TraesCS3A01G146800.1 | Wheat | plastid | 28.62 | 14.68 |
| TraesCS2A01G508900.1 | Wheat | plastid | 27.67 | 14.29 |
| TraesCS6A01G274900.1 | Wheat | mitochondrion | 16.67 | 14.06 |
| TraesCS1A01G221000.1 | Wheat | plastid | 23.9 | 13.04 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0051287 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00389 | PFAM:PF02826 | PANTHER:PTHR10996 | PANTHER:PTHR10996:SF139 |
| SUPFAM:SSF51735 | SUPFAM:SSF52283 | EnsemblPlantsGene:TraesCS3A01G153500 | EnsemblPlants:TraesCS3A01G153500.1 | TIGR:cd12156 | SEG:seg |
Description
No Description!
Coordinates
chr3A:-:144155257..144163585
Molecular Weight (calculated)
34703.9 Da
IEP (calculated)
5.692
GRAVY (calculated)
0.051
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMESLGVLL LHPMNAYLEQ ELDRRFRLFR FWDSPPDGRA EFLRANASAI RAVVGNASYN ADAALIDALP SLEIVASFSV GIDRVDLPKC RERGIRVTNT
101: PDVLTDDVAD LAVGLAIAAL RKIPQADRYV RAGLWKAKGD YTLTTRFSGK RVGIIGLGRI GLAIATRVEA FDCPVNYYQR TKKDYPSYTY YPSVVELAAN
201: SDILVVACPL NEQTRHIVNR EVIEALGPKG LLINIGRGPH VDEPELVSAL VEGRLGGAGL DVFEDEPNVP EALFTLDNVV LVPHVGSGTH ETRQAMADLV
301: LGNLEAHVLK KPLLTPVV
101: PDVLTDDVAD LAVGLAIAAL RKIPQADRYV RAGLWKAKGD YTLTTRFSGK RVGIIGLGRI GLAIATRVEA FDCPVNYYQR TKKDYPSYTY YPSVVELAAN
201: SDILVVACPL NEQTRHIVNR EVIEALGPKG LLINIGRGPH VDEPELVSAL VEGRLGGAGL DVFEDEPNVP EALFTLDNVV LVPHVGSGTH ETRQAMADLV
301: LGNLEAHVLK KPLLTPVV
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Arabidopsis Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.