CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g044250.1.1	Tomato	vacuole	67.33	64.76
KRH44352	Soybean	peroxisome	32.34	64.05
PGSC0003DMT400019586	Potato	extracellular	66.01	63.49
Bra035206.1-P	Field mustard	cytosol	62.71	61.29
CDX87280	Canola	cytosol	62.71	61.29
CDX67931	Canola	cytosol	62.71	60.7
CDY58781	Canola	cytosol	62.71	60.7
Bra003537.1-P	Field mustard	cytosol	62.38	60.38
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	62.38	60.38
AT1G79870.1	Thale cress	cytosol	62.38	60.38
CDX79406	Canola	cytosol	62.38	60.38
GSMUA_Achr3P03420_001	Banana	cytosol	62.71	60.13
KRH47286	Soybean	nucleus	59.74	57.83
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	59.41	56.96
TraesCS3A01G153500.1	Wheat	peroxisome	59.74	56.92
GSMUA_Achr3P31530_001	Banana	cytosol	59.08	56.65
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	58.75	56.33
TraesCS4B01G324200.1	Wheat	peroxisome	58.75	56.33
Os01t0228600-01	Rice	extracellular	58.09	55.7
KXG31500	Sorghum	cytosol	57.76	55.56
Zm00001d030544_P001	Maize	cytosol, extracellular	56.77	53.75
KRH48312	Soybean	cytosol	41.58	37.39
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	59.41	37.04
KRH48313	Soybean	cytosol	40.92	36.9
KRH48310	Soybean	cytosol	38.94	35.33
KRH48311	Soybean	cytosol	37.95	34.43
KRH65201	Soybean	plastid	32.01	33.8
KRH65202	Soybean	cytosol	23.43	31.56
KRH36064	Soybean	nucleus	26.4	20.73
KRG90684	Soybean	nucleus	26.4	20.73
KRH62463	Soybean	mitochondrion	25.08	19.44
KRG93315	Soybean	mitochondrion	22.11	17.87
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	21.45	16.75
KRG93317	Soybean	nucleus	21.45	16.71
KRG91030	Soybean	endoplasmic reticulum	25.74	13.11
KRH35731	Soybean	nucleus	25.41	12.96
KRH23702	Soybean	extracellular	24.09	12.46
KRH47008	Soybean	endoplasmic reticulum	24.75	12.04
KRH44645	Soybean	nucleus	24.42	11.92
TraesCS3D01G160900.1	Wheat	cytosol	6.93	11.29

Protein Annotations

EntrezGene:102662120	Gene3D:3.40.50.720	MapMan:50.1.1	EMBL:ACUP02009113	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1
InterPro:D-isomer_DH_NAD-bd	EnsemblPlantsGene:GLYMA_15G016100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287
GO:GO:0055114	UniProt:I1MCQ6	EnsemblPlants:KRH09880	ProteinID:KRH09880	ProteinID:KRH09880.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF139	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI0001D83AE9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:1263057..1264560

Molecular Weight (calculated)

32810.6 Da

IEP (calculated)

5.713

GRAVY (calculated)

0.180

Length

303 amino acids

Sequence
(BLAST)

001: MESIGVLMTC PMHSYIQEEL AKRFNLFKLW HYPSFSAFAQ AHAHSIRALV ASAKVGVDAA TIDSLPNLEI VSTYSVGYDN IDLHKCRHRA IPVTNTPNVL
101: TDDVADVAIA LALSLLCRIC PRNSTWQFTP KLSGKAVGIV GLGRIGWAIA KRAEGFGCPV SYHSRSEKSE TGYKYYSHII DLAANSEVLF VACTLSEETR
201: HIVNRGVIDA LGPKGILINV GRGPHVDEPE LVAALIEGRL GGAGLDVFEN EPEVPEDLLG LENLVMTPHV GTDTLETCIA MGDLVIANLE AHFLGNPLFT
301: PVL

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.