Factsheet for PGSC0003DMT400019586

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g044250.1.1	Tomato	vacuole	92.7	92.7
PGSC0003DMT400019584	Potato	cytosol	71.11	71.57
AT1G79870.1	Thale cress	cytosol	70.16	70.61
Bra035206.1-P	Field mustard	cytosol	69.21	70.32
CDX87280	Canola	cytosol	69.21	70.32
CDX67931	Canola	cytosol	69.84	70.29
CDX79406	Canola	cytosol	69.84	70.29
Bra003537.1-P	Field mustard	cytosol	69.52	69.97
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	69.21	69.65
CDY58781	Canola	cytosol	68.89	69.33
GSMUA_Achr3P03420_001	Banana	cytosol	66.35	66.14
KRH09880	Soybean	cytosol	63.49	66.01
TraesCS3A01G153500.1	Wheat	peroxisome	65.4	64.78
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	64.76	64.56
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	64.44	64.24
TraesCS4B01G324200.1	Wheat	peroxisome	63.49	63.29
KXG31500	Sorghum	cytosol	62.54	62.54
GSMUA_Achr3P31530_001	Banana	cytosol	60.63	60.44
Os01t0228600-01	Rice	extracellular	60.63	60.44
Zm00001d030544_P001	Maize	cytosol, extracellular	59.68	58.75
PGSC0003DMT400058518	Potato	cytosol	21.27	48.2
PGSC0003DMT400058520	Potato	cytosol	47.62	46.15
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	64.44	41.77
PGSC0003DMT400015828	Potato	cytosol	30.48	24.87
PGSC0003DMT400071027	Potato	cytosol	22.86	23.38
PGSC0003DMT400085920	Potato	mitochondrion	13.65	23.37
PGSC0003DMT400001303	Potato	mitochondrion	22.54	18.64
PGSC0003DMT400046698	Potato	plastid	27.62	14.5
PGSC0003DMT400068907	Potato	cytosol	6.67	13.91
PGSC0003DMT400059818	Potato	plastid	25.71	13.61
TraesCS3D01G160900.1	Wheat	cytosol	7.62	12.9
PGSC0003DMT400023675	Potato	plastid	26.03	12.85

Protein Annotations

EntrezGene:102591956	Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	UniProt:M1ACA0	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	EnsemblPlantsGene:PGSC0003DMG400007573	PGSC:PGSC0003DMG400007573	EnsemblPlants:PGSC0003DMT400019586	ScanProsite:PS00065
PANTHER:PTHR10996	PANTHER:PTHR10996:SF139	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000294A884	RefSeq:XP_006359457.1

Description

Hydroxyphenylpyruvate reductase (HPPR) [Source:PGSC_GENE;Acc:PGSC0003DMG400007573]

Coordinates

chr12:-:50608880..50612113

Molecular Weight (calculated)

34189.4 Da

IEP (calculated)

4.975

GRAVY (calculated)

0.200

Length

315 amino acids

Sequence
(BLAST)

001: MAMAKIGVLM TCPMLSYLEE ELNKRFDLFR FWEASSKSEF LTQNSDSVRA VVGNAFFGAE SELIDALPNL EIVSSYSVGL DKIDLVKCKE RGIRVTNTPD
101: VLTDDVADAA IGLILATLRR ICVADGFVRR GLWKNGDFEL TSKFSGKLVG IIGLGRIGSA IAKRAEAFGC PISYHSRSKR PNLNYKYYST VVDLAASSEI
201: LIVACALTEE TRDIVNRKVL DALGPKGILI NIGRGAHVDE SELVAALIEG RIGGAGLDVY QTEPEVPEQL FGLENVVLLS HAASDTVETC TAMADLVIAN
301: LEAHFLHKPL LTPVL

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.