Factsheet for Bra035206.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87280	Canola	cytosol	99.68	99.68
AT1G79870.1	Thale cress	cytosol	87.74	86.9
Bra003537.1-P	Field mustard	cytosol	86.45	85.62
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	78.06	77.32
VIT_09s0002g04300.t01	Wine grape	cytosol	73.55	72.84
Solyc12g044260.1.1	Tomato	cytosol	73.55	72.84
PGSC0003DMT400019584	Potato	cytosol	72.9	72.2
KRH47286	Soybean	nucleus	72.26	71.57
Solyc12g044250.1.1	Tomato	vacuole	71.94	70.79
KRH44352	Soybean	peroxisome	34.52	69.93
PGSC0003DMT400019586	Potato	extracellular	70.32	69.21
GSMUA_Achr3P03420_001	Banana	cytosol	68.71	67.41
TraesCS3A01G153500.1	Wheat	peroxisome	68.71	66.98
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	68.06	66.77
TraesCS3D01G160800.1	Wheat	cytosol	68.39	66.67
KXG31500	Sorghum	cytosol	66.77	65.71
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	65.48	64.86
TraesCS4B01G324200.1	Wheat	peroxisome	65.81	64.56
Os01t0228600-01	Rice	extracellular	65.16	63.92
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	64.19	62.97
KRH09880	Soybean	cytosol	61.29	62.71
Solyc03g120680.2.1	Tomato	nucleus	61.94	61.74
GSMUA_Achr3P31530_001	Banana	cytosol	61.94	60.76
Zm00001d030544_P001	Maize	cytosol, extracellular	59.35	57.5
Bra026966.1-P	Field mustard	cytosol	36.45	47.28
Bra035498.1-P	Field mustard	cytosol	14.84	46.94
Bra019774.1-P	Field mustard	cytosol	49.35	44.35
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	68.39	43.62
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	40.32	31.49
Bra004275.1-P	Field mustard	cytosol	28.71	23.06
Bra004055.1-P	Field mustard	cytosol	28.06	22.54
Bra003888.1-P	Field mustard	mitochondrion	25.48	21.24
Bra008737.1-P	Field mustard	mitochondrion	23.55	19.01
Bra023487.1-P	Field mustard	mitochondrion	22.9	18.49
Bra017637.1-P	Field mustard	plastid	26.45	13.71
Bra016589.1-P	Field mustard	plastid	27.42	13.69
Bra034616.1-P	Field mustard	plastid	25.81	13.31
Bra001747.1-P	Field mustard	plastid	24.52	12.95
Bra011506.1-P	Field mustard	plastid	25.81	12.88
TraesCS3D01G160900.1	Wheat	cytosol	7.1	11.83
Bra034615.1-P	Field mustard	cytosol	1.61	2.92

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra035206	EnsemblPlants:Bra035206.1	EnsemblPlants:Bra035206.1-P	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
UniProt:M4F2A8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996
PANTHER:PTHR10996:SF139	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0002541EA6	SEG:seg	:

Description

AT1G79870 (E=1e-148) | oxidoreductase family protein

Coordinates

chrA07:-:22582052..22583113

Molecular Weight (calculated)

34054.2 Da

IEP (calculated)

5.247

GRAVY (calculated)

0.073

Length

310 amino acids

Sequence
(BLAST)

001: MESIGVLMMC PMSSYLENEL QKRFNLVRFW NFPVFLETHR NSIRAVVGNA STGADAELID GLPKLEIISS FSVGIDKIDL GKCKEKGIRV TNTPDVLTED
101: VADLAIGLIL ALLRRLCECD RYVRSRKWEY GDFQLATKFS GKSVGILGLG RIGTAIAKRA EAFSCPVSYY SRRVKPDLGY KYYPTVVELA QNSDILVVAC
201: PLTDETRHIV NRHVMDALGA KGVLINIGRG PHVDEEELVN ALTEGRLGGA ALDVFEQEPH VPEELFPLEN VVLLPHVGSS TVETENAMAD LVVANLEAHF
301: AGKSLLTPVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.