Factsheet for TraesCS3D01G160800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G153500.1	Wheat	peroxisome	98.43	98.43
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	97.17	97.78
KXG31500	Sorghum	cytosol	84.59	85.4
Os01t0228600-01	Rice	extracellular	81.76	82.28
Zm00001d030544_P001	Maize	cytosol, extracellular	74.84	74.38
GSMUA_Achr3P03420_001	Banana	cytosol	73.9	74.37
AT1G79870.1	Thale cress	cytosol	68.55	69.65
CDX79406	Canola	cytosol	67.92	69.01
Bra035206.1-P	Field mustard	cytosol	66.67	68.39
CDX87280	Canola	cytosol	66.67	68.39
Bra003537.1-P	Field mustard	cytosol	67.3	68.37
CDX67931	Canola	cytosol	67.3	68.37
GSMUA_Achr3P31530_001	Banana	cytosol	66.67	67.09
CDY58781	Canola	cytosol	65.72	66.77
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	96.86	63.37
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	49.06	48.9
TraesCS2D01G034600.1	Wheat	mitochondrion	49.37	47.58
TraesCS2D01G034100.1	Wheat	mitochondrion	48.11	47.22
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	49.06	46.71
TraesCS2D01G030900.1	Wheat	cytosol	44.03	44.3
TraesCS2D01G034300.1	Wheat	plastid	46.54	40.88
TraesCS6D01G001700.1	Wheat	golgi, plastid	29.56	24.35
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	23.58	19.84
TraesCS4D01G007200.1	Wheat	golgi	22.01	18.67
TraesCS7D01G232300.1	Wheat	mitochondrion	22.01	18.57
TraesCS6D01G255200.2	Wheat	mitochondrion	21.7	18.3
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	20.75	17.98
TraesCS7D01G483800.1	Wheat	plastid	29.56	15.41
TraesCS1D01G222600.2	Wheat	plastid	28.3	14.54
TraesCS3D01G160900.1	Wheat	cytosol	8.18	13.98

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF139
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS3D01G160800	EnsemblPlants:TraesCS3D01G160800.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr3D:-:131354863..131358626

Molecular Weight (calculated)

34530.7 Da

IEP (calculated)

5.428

GRAVY (calculated)

0.075

Length

318 amino acids

Sequence
(BLAST)

001: MAMESLGVLL LHPMNAYLEQ ELDSRFRLFR FWDSPPDGRA EFLRANSSAI RAVVGNAGYN ADAALIDALP SLEIVASFSV GIDRVDLPKC RERGIRVTNT
101: PDVLTDDVAD LAVGLAIAAL RKIPQADRYV RAGLWKAKGD YTLTTRFSGK RVGIIGLGRI GLAIATRVEA FDCPVNYYQR TKKDCPSYTY YPSVVELAAN
201: SDILVVACPL NEQTRHIVNR EVIEALGPKG LLINIGRGPH VDEPELVSAL VEGRLGGAGL DVFEDEPNVP EALFALDNVV LVPHVGSGTH ETRQAMADLV
301: LGNLEAHVLK KPLLTPVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.