CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87280	Canola	cytosol	93.61	94.52
AT1G79870.1	Thale cress	cytosol	87.86	87.86
CDX67931	Canola	cytosol	85.62	85.62
CDX79406	Canola	cytosol	85.62	85.62
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	77.32	77.32
Solyc12g044260.1.1	Tomato	cytosol	72.84	72.84
VIT_09s0002g04300.t01	Wine grape	cytosol	72.52	72.52
PGSC0003DMT400019584	Potato	cytosol	72.2	72.2
KRH47286	Soybean	nucleus	71.25	71.25
Solyc12g044250.1.1	Tomato	vacuole	70.93	70.48
KRH44352	Soybean	peroxisome	33.87	69.28
PGSC0003DMT400019586	Potato	extracellular	69.33	68.89
GSMUA_Achr3P03420_001	Banana	cytosol	67.09	66.46
TraesCS3A01G153500.1	Wheat	peroxisome	67.09	66.04
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	66.45	65.82
TraesCS3D01G160800.1	Wheat	cytosol	66.77	65.72
KXG31500	Sorghum	cytosol	65.18	64.76
TraesCS4B01G324200.1	Wheat	peroxisome	64.54	63.92
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	63.9	63.9
Os01t0228600-01	Rice	extracellular	63.58	62.97
KRH09880	Soybean	cytosol	60.7	62.71
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	62.94	62.34
Solyc03g120680.2.1	Tomato	nucleus	61.02	61.41
GSMUA_Achr3P31530_001	Banana	cytosol	60.06	59.49
Zm00001d030544_P001	Maize	cytosol, extracellular	58.47	57.19
CDY17092	Canola	cytosol	16.61	49.06
CDY54697	Canola	mitochondrion	23.0	48.65
CDY26572	Canola	cytosol	35.14	45.64
CDY16011	Canola	cytosol, peroxisome, plastid	42.49	44.93
CDY57070	Canola	cytosol	46.01	44.72
CDX98054	Canola	cytosol	48.56	44.06
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	66.77	43.0
CDY26571	Canola	plastid	38.34	40.54
CDY16012	Canola	cytosol, nucleus, peroxisome	29.39	38.17
CDY16010	Canola	cytosol, nucleus, plastid	48.24	27.4
CDY26570	Canola	cytosol	33.23	23.11
CDY07405	Canola	cytosol	27.16	22.02
CDY04198	Canola	cytosol	27.16	21.57
CDY50445	Canola	mitochondrion	25.56	21.45
CDX68275	Canola	mitochondrion	24.92	20.97
CDY09885	Canola	mitochondrion	23.64	19.32
CDX69558	Canola	mitochondrion	23.64	19.27
CDX85582	Canola	mitochondrion	23.32	19.06
CDY57736	Canola	plastid	23.0	18.9
CDX96054	Canola	mitochondrion	27.48	18.78
CDX91020	Canola	mitochondrion	23.0	18.75
CDY49286	Canola	plastid	25.88	13.55
CDX72462	Canola	plastid	25.88	13.55
CDX96754	Canola	plastid	26.84	13.53
CDX83893	Canola	plastid	26.84	13.5
CDX75409	Canola	plastid	25.56	13.42
CDX76268	Canola	plastid	25.56	13.33
CDX82295	Canola	plastid	23.96	12.78
CDY22972	Canola	plastid	23.96	12.78
CDX69034	Canola	plastid	25.56	12.66
CDY01876	Canola	endoplasmic reticulum, plasma membrane	27.48	12.41
CDY12275	Canola	cytosol	12.46	11.4
TraesCS3D01G160900.1	Wheat	cytosol	6.71	11.29
CDY57737	Canola	cytosol	1.6	2.92

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078J0Q1	UniProt:A0A078J0Q1	EnsemblPlants:CDY58781	ProteinID:CDY58781
ProteinID:CDY58781.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00025137001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF139	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EAC4AC

Description

BnaCnng33820DBnaCnng33820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0Q1]

Coordinates

chrLK033698:-:42906..44083

Molecular Weight (calculated)

34297.4 Da

IEP (calculated)

5.090

GRAVY (calculated)

0.044

Length

313 amino acids

Sequence
(BLAST)

001: MESIGVLMMC PMSSYLENEL QKRFNLIRFW NFQEKSVFLE THRNSIGAVV GNASTGADAE LINDLPKLEI ISSFSVGIDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADVAIS LILTLLRRLC ECDRYVRSGK WKYGDFQLTT KFSGKSLGIL GLGRIGTAIA KRAEAFSCPV SYYSRRVKPD LGYKYYPTVV ELAQNSDILV
201: VACPLTDETR HIVNRNVMDA LGAKGVLINI GRGPHVDEQE LVNALTEGRL GGAALDVFEQ EPHVPEELFG LQNVVLLPHV GSGTVETENA MADLVVANLE
301: AHFAGESLLT PVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.