CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004055.1-P	Field mustard	cytosol	96.45	98.45
CDY07405	Canola	cytosol	96.45	98.45
AT1G68010.2	Thale cress	cytosol	93.65	95.35
Solyc01g111630.2.1	Tomato	nucleus, plastid	87.56	89.38
PGSC0003DMT400015828	Potato	cytosol	87.56	89.38
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	86.55	88.34
KRG90684	Soybean	nucleus	84.52	86.27
KRH36064	Soybean	nucleus	84.01	85.75
TraesCS6D01G001700.1	Wheat	golgi, plastid	82.74	84.46
TraesCS6B01G004400.1	Wheat	peroxisome	82.74	84.46
TraesCS6A01G000400.1	Wheat	peroxisome	82.49	84.2
Os02t0101500-02	Rice	extracellular, mitochondrion	81.98	83.68
KXG29243	Sorghum	cytosol	80.71	83.46
HORVU6Hr1G017010.1	Barley	cytosol	22.59	83.18
CDX96054	Canola	mitochondrion	95.43	82.1
GSMUA_Achr5P18940_001	Banana	cytosol	32.49	81.53
GSMUA_Achr5P18950_001	Banana	cytosol	46.45	81.33
TraesCS5B01G226200.1	Wheat	cytosol	23.86	69.63
HORVU6Hr1G000640.1	Barley	cytosol	53.05	68.98
Zm00001d014919_P002	Maize	mitochondrion	72.08	65.74
HORVU6Hr1G000650.2	Barley	peroxisome	31.47	64.25
CDY01876	Canola	endoplasmic reticulum, plasma membrane	95.18	54.11
CDX67931	Canola	cytosol	23.6	29.71
CDX79406	Canola	cytosol	23.6	29.71
CDY17092	Canola	cytosol	7.87	29.25
CDX87280	Canola	cytosol	22.08	28.06
CDY58781	Canola	cytosol	21.57	27.16
CDY54697	Canola	mitochondrion	9.9	26.35
CDY57070	Canola	cytosol	21.32	26.09
CDX98054	Canola	cytosol	21.57	24.64
CDY26572	Canola	cytosol	14.47	23.65
CDY16011	Canola	cytosol, peroxisome, plastid	17.77	23.65
CDY57736	Canola	plastid	21.57	22.31
CDY16012	Canola	cytosol, nucleus, peroxisome	12.69	20.75
CDY26571	Canola	plastid	15.48	20.61
CDX68275	Canola	mitochondrion	19.04	20.16
CDY50445	Canola	mitochondrion	19.04	20.11
CDX85582	Canola	mitochondrion	18.53	19.06
CDY09885	Canola	mitochondrion	18.27	18.8
CDX69558	Canola	mitochondrion	18.02	18.49
CDX91020	Canola	mitochondrion	17.77	18.23
CDX82295	Canola	plastid	25.89	17.38
CDY22972	Canola	plastid	25.89	17.38
CDX75409	Canola	plastid	24.62	16.28
CDX96754	Canola	plastid	25.63	16.26
CDX83893	Canola	plastid	25.63	16.24
CDY49286	Canola	plastid	24.37	16.05
CDX72462	Canola	plastid	24.37	16.05
CDX76268	Canola	plastid	24.11	15.83
CDX69034	Canola	plastid	24.62	15.35
CDY16010	Canola	cytosol, nucleus, plastid	21.07	15.06
CDY26570	Canola	cytosol	14.97	13.11
CDY12275	Canola	cytosol	10.41	11.99
CDY57737	Canola	cytosol	2.28	5.26

Protein Annotations

MapMan:1.3.6	Gene3D:3.40.50.720	GO:A0A078EX89	EnsemblPlants:CDY04198	ProteinID:CDY04198	ProteinID:CDY04198.1
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00117904001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996
PANTHER:PTHR10996:SF137	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EE4DEA	SEG:seg	:

Description

BnaC06g26170D

Coordinates

chrLK031950:+:47825..50521

Molecular Weight (calculated)

43206.4 Da

IEP (calculated)

7.562

GRAVY (calculated)

-0.066

Length

394 amino acids

Sequence
(BLAST)

001: MAKPMAIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG NKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADGFMRAGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEV ALVDHLRENP MFRVGLDVFE
301: EEPFMKPGLA DMKNAIVVPH IASASKWTRE GMATLAALNV LGRIKGYPIW SDPNRVDPFL NENASPPNAS PSIVNSKALG NAAHHTQPSD YFKC

Best Arabidopsis Sequence Match ( AT1G68010.1 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.