Factsheet for VIT_03s0038g02510.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 3
plastid 2
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90684	Soybean	nucleus	90.93	90.93
KRH36064	Soybean	nucleus	90.41	90.41
AT1G68010.2	Thale cress	cytosol	90.41	90.18
Bra004055.1-P	Field mustard	cytosol	89.9	89.9
Solyc01g111630.2.1	Tomato	nucleus, plastid	89.9	89.9
CDY07405	Canola	cytosol	89.9	89.9
PGSC0003DMT400015828	Potato	cytosol	89.38	89.38
Bra004275.1-P	Field mustard	cytosol	89.38	89.38
CDY04198	Canola	cytosol	88.34	86.55
TraesCS6D01G001700.1	Wheat	golgi, plastid	86.27	86.27
TraesCS6B01G004400.1	Wheat	peroxisome	86.27	86.27
TraesCS6A01G000400.1	Wheat	peroxisome	86.27	86.27
Os02t0101500-02	Rice	extracellular, mitochondrion	86.27	86.27
GSMUA_Achr5P18940_001	Banana	cytosol	34.97	85.99
KXG29243	Sorghum	cytosol	84.46	85.56
GSMUA_Achr5P18950_001	Banana	cytosol	48.96	84.0
HORVU6Hr1G017010.1	Barley	cytosol	23.06	83.18
CDX96054	Canola	mitochondrion	90.16	75.98
TraesCS5B01G226200.1	Wheat	cytosol	24.87	71.11
HORVU6Hr1G000640.1	Barley	cytosol	54.66	69.64
HORVU6Hr1G000650.2	Barley	peroxisome	34.46	68.91
Zm00001d014919_P002	Maize	mitochondrion	76.17	68.06
CDY01876	Canola	endoplasmic reticulum, plasma membrane	89.12	49.64
VIT_09s0002g04300.t01	Wine grape	cytosol	23.83	29.39
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	21.24	26.2
VIT_02s0025g04730.t01	Wine grape	cytosol	20.21	24.61
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	18.39	24.48
VIT_18s0041g01830.t01	Wine grape	cytosol	18.39	20.7
VIT_14s0066g01320.t01	Wine grape	mitochondrion	18.13	18.28
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	20.47	17.14
VIT_09s0018g01870.t01	Wine grape	plastid	26.42	16.35
VIT_18s0001g09890.t01	Wine grape	plastid	24.87	15.87
VIT_03s0180g00130.t01	Wine grape	cytosol	25.91	15.31

Protein Annotations

MapMan:1.3.6	EntrezGene:100262344	wikigene:100262344	Gene3D:3.40.50.720	EMBL:AM439490	ProteinID:CAN65023
ProteinID:CAN65023.1	ProteinID:CBI37862	ProteinID:CBI37862.3	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd
UniProt:D7U543	EMBL:FN596508	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287
GO:GO:0055114	EntrezGene:LOC100262344	wikigene:LOC100262344	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF137	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGR:TC54577
TIGR:TC57226	TIGR:TC61548	TIGR:TC70044	UniParc:UPI0001982E12	ArrayExpress:VIT_03s0038g02510	EnsemblPlantsGene:VIT_03s0038g02510
EnsemblPlants:VIT_03s0038g02510.t01	unigene:Vvi.206	RefSeq:XP_002279281	RefSeq:XP_002279281.1	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:1749658..1752878

Molecular Weight (calculated)

42286.5 Da

IEP (calculated)

7.886

GRAVY (calculated)

0.011

Length

386 amino acids

Sequence
(BLAST)

001: MAKPVSIEVW NPCGKYRVVS TKPMPGTRWI DLLVQQDCRV EICTQKKTIL SVEDIIALIG DKCDGVIGQL TEDWGETLFS ALSRAGGRAF SNMAVGYNNV
101: DVNAANKYGV AVGNTPGVLT ETTAELAASL SMAAARRIVE ADEFMRAGLY DGWLPHLFVG NLLRGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYYDLYQA
201: TRLEKFVTAY GQFLKASGEQ PVTWKRAASM DEVLREADLI SLHPVLDKTT YHLVNKERLS MMKKEAILIN CSRGPVIDEV ALVAHLKENP MFRVGLDVFE
301: DEPYMKPGLA EMKNAIVVPH IASASKWTRE GMATLAALNV LGKIKGYPIW HDPNKVEPFL NENSLPPAAS PSIVNAKALG LPVSKL

Best Arabidopsis Sequence Match ( AT1G68010.1 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.