Factsheet for VIT_02s0025g04730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	63.41	69.31
GSMUA_Achr4P17980_001	Banana	cytosol	19.56	57.94
CDY17092	Canola	cytosol	18.61	55.66
HORVU2Hr1G005210.2	Barley	mitochondrion	47.63	54.51
Bra035498.1-P	Field mustard	cytosol	16.72	54.08
CDY57070	Canola	cytosol	52.37	51.55
CDY54697	Canola	mitochondrion	23.66	50.68
GSMUA_Achr5P14420_001	Banana	cytosol	52.37	50.3
GSMUA_Achr5P14430_001	Banana	mitochondrion	47.63	49.67
TraesCS2A01G035400.1	Wheat	mitochondrion	50.79	48.79
Bra026966.1-P	Field mustard	cytosol	36.59	48.54
TraesCS2D01G030900.1	Wheat	cytosol	48.27	48.42
Bra019774.1-P	Field mustard	cytosol	52.68	48.41
CDX98054	Canola	cytosol	52.68	48.41
TraesCS2D01G034600.1	Wheat	mitochondrion	50.16	48.18
CDY26572	Canola	cytosol	36.59	48.13
Os04t0107200-01	Rice	mitochondrion	49.84	48.02
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	48.27	47.96
CDY16011	Canola	cytosol, peroxisome, plastid	44.48	47.64
Os04t0107500-01	Rice	plasma membrane	47.32	47.47
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	49.84	47.31
HORVU4Hr1G086940.2	Barley	cytosol	19.24	47.29
TraesCS2A01G034900.1	Wheat	mitochondrion	48.27	47.22
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	47.0	47.15
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	47.0	47.15
Zm00001d024906_P001	Maize	cytosol	48.9	47.11
TraesCS2B01G048500.1	Wheat	cytosol	49.84	46.88
OQU81061	Sorghum	plastid	47.0	46.71
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	49.21	46.71
TraesCS2B01G048000.1	Wheat	mitochondrion	47.32	46.3
Zm00001d018790_P001	Maize	extracellular, plasma membrane	45.43	46.01
OQU81058	Sorghum	cytosol	48.58	45.97
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	49.53	45.77
TraesCS2D01G034100.1	Wheat	mitochondrion	46.69	45.68
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	48.27	45.67
EES10400	Sorghum	cytosol	48.58	45.56
EES10352	Sorghum	cytosol, mitochondrion	48.27	45.27
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	46.69	44.98
EES11738	Sorghum	cytosol	47.95	44.97
OQU88433	Sorghum	cytosol	45.11	44.55
EES11740	Sorghum	mitochondrion	46.37	44.55
Zm00001d024907_P001	Maize	mitochondrion	47.32	44.51
VIT_09s0002g04300.t01	Wine grape	cytosol	43.85	44.41
CDY26571	Canola	plastid	41.32	44.26
Zm00001d008883_P001	Maize	mitochondrion	46.06	44.24
TraesCS7A01G538500.1	Wheat	cytosol	47.95	44.19
Zm00001d004451_P001	Maize	cytosol	46.69	43.92
TraesCS7B01G456600.1	Wheat	cytosol, plastid	47.63	43.9
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	44.48	43.65
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	44.48	43.65
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	48.9	43.42
Os11t0229100-01	Rice	extracellular	18.93	43.17
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	42.59	43.13
Os04t0107300-01	Rice	mitochondrion, plasma membrane	44.16	42.94
TraesCS2B01G048100.1	Wheat	plastid	45.74	42.15
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	58.68	40.35
CDY16012	Canola	cytosol, nucleus, peroxisome	30.6	40.25
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	44.48	38.95
TraesCS2D01G034300.1	Wheat	plastid	43.53	38.12
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	42.59	34.01
HORVU2Hr1G005150.2	Barley	plastid	35.96	31.93
CDY16010	Canola	cytosol, nucleus, plastid	50.47	29.04
CDY26570	Canola	cytosol	36.91	26.0
VIT_18s0041g01830.t01	Wine grape	cytosol	23.66	21.87
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	24.61	20.21
VIT_14s0066g01320.t01	Wine grape	mitochondrion	23.34	19.32
VIT_18s0001g09890.t01	Wine grape	plastid	24.61	12.89
VIT_09s0018g01870.t01	Wine grape	plastid	24.92	12.66
VIT_03s0180g00130.t01	Wine grape	cytosol	25.55	12.4

Protein Annotations

EntrezGene:100253090	wikigene:100253090	Gene3D:3.40.50.720	MapMan:50.1.1	ProteinID:CCB58418	ProteinID:CCB58418.1
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	UniProt:F6HUJ5	EMBL:FN596251	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618
GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	EntrezGene:LOC100253090	wikigene:LOC100253090	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	SUPFAM:SSF51735	SUPFAM:SSF52283
TIGR:TC70223	UniParc:UPI00021088BD	ArrayExpress:VIT_02s0025g04730	EnsemblPlantsGene:VIT_02s0025g04730	EnsemblPlants:VIT_02s0025g04730.t01	unigene:Vvi.483
RefSeq:XP_002282078	RefSeq:XP_002282078.1	:	:	:	:

Description

No Description!

Coordinates

chr2:+:4287650..4290679

Molecular Weight (calculated)

34107.4 Da

IEP (calculated)

6.095

GRAVY (calculated)

0.202

Length

317 amino acids

Sequence
(BLAST)

001: MAAITGEAEA EAPGVVFVHG SPPFGLPFKD RLLSRFQLIH MSELPESSHV KVMLCMDHTP VTSQTLYKLP SLECIVASSA GVDHIDLTTC RLRGIAVANG
101: SQAFSEDVAD YAVALLMDVL RKISAGDRYL RSGLWSTKGD YPLGWKLGGK RVGIVGLGNI GSEVAKRLVA FGCAIAYNSR KKRSSVSFPY YADVCDLAAN
201: SDILVICGAL TSETHHIINK DVMTALGKEG VIINVGRGSL INQKELVQFL VEGQIRGAGL DVFENEPIVP RELLELDNVV LSPHNAVVTP EAFEAMQELA
301: ISNLGAFFSN KPLLSPI

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.