Factsheet for TraesCS2D01G034100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G034900.1	Wheat	mitochondrion	95.68	95.68
TraesCS2B01G048000.1	Wheat	mitochondrion	94.14	94.14
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	76.54	76.78
Os04t0107300-01	Rice	mitochondrion, plasma membrane	70.37	69.94
Os11t0229100-01	Rice	extracellular	27.78	64.75
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	63.27	61.38
TraesCS2D01G034600.1	Wheat	mitochondrion	61.11	60.0
GSMUA_Achr5P14420_001	Banana	cytosol	56.79	55.76
GSMUA_Achr5P14430_001	Banana	mitochondrion	52.16	55.59
GSMUA_Achr4P17980_001	Banana	cytosol	18.21	55.14
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	52.78	53.6
TraesCS2D01G034300.1	Wheat	plastid	59.88	53.59
TraesCS2D01G030900.1	Wheat	cytosol	50.31	51.58
Solyc08g080030.2.1	Tomato	cytosol	42.9	51.48
PGSC0003DMT400058518	Potato	cytosol	21.3	49.64
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	43.83	48.97
TraesCS3D01G160800.1	Wheat	cytosol	47.22	48.11
CDY26572	Canola	cytosol	35.19	47.3
Bra026966.1-P	Field mustard	cytosol	34.88	47.28
CDY57070	Canola	cytosol	46.91	47.2
KRH48312	Soybean	cytosol	48.77	46.88
AT2G45630.2	Thale cress	plastid	48.77	46.75
VIT_02s0025g04730.t01	Wine grape	cytosol	45.68	46.69
PGSC0003DMT400058520	Potato	cytosol	46.6	46.46
CDY54697	Canola	mitochondrion	20.99	45.95
KRH48313	Soybean	cytosol	46.6	44.94
Bra035498.1-P	Field mustard	cytosol	13.58	44.9
Solyc01g093990.2.1	Tomato	cytosol	44.75	44.89
CDY17092	Canola	cytosol	14.51	44.34
Bra019774.1-P	Field mustard	cytosol	46.91	44.06
CDX98054	Canola	cytosol	46.91	44.06
CDY16011	Canola	cytosol, peroxisome, plastid	40.12	43.92
KRH48311	Soybean	cytosol	42.9	41.62
CDY16012	Canola	cytosol, nucleus, peroxisome	30.86	41.49
KRH65202	Soybean	cytosol	28.7	41.33
CDY26571	Canola	plastid	37.04	40.54
KRH48310	Soybean	cytosol	41.36	40.12
KRH65201	Soybean	plastid	34.57	39.02
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.62	35.57
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	38.89	31.74
CDY16010	Canola	cytosol, nucleus, plastid	46.91	27.59
CDY26570	Canola	cytosol	34.57	24.89
TraesCS6D01G001700.1	Wheat	golgi, plastid	28.09	23.58
TraesCS6D01G255200.2	Wheat	mitochondrion	24.07	20.69
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	24.07	20.63
TraesCS7D01G232300.1	Wheat	mitochondrion	23.77	20.42
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	22.84	20.16
TraesCS4D01G007200.1	Wheat	golgi	23.15	20.0
TraesCS7D01G483800.1	Wheat	plastid	31.48	16.72
TraesCS1D01G222600.2	Wheat	plastid	30.56	15.99
TraesCS3D01G160900.1	Wheat	cytosol	4.63	8.06

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
PANTHER:PTHR10996	PANTHER:PTHR10996:SF158	SUPFAM:SSF51735	SUPFAM:SSF52283	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2D01G034100
EnsemblPlants:TraesCS2D01G034100.1	TIGR:cd12156	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:13199801..13200775

Molecular Weight (calculated)

33889.1 Da

IEP (calculated)

6.924

GRAVY (calculated)

0.397

Length

324 amino acids

Sequence
(BLAST)

001: MAATRRVLVL CRLSPASLAG LAARFSLLDR HASPLSMEAF LAAAAADVDP PRLALVPGVG VRVDAAFLDA VPSLRCVVTV SAGLNHVDLP ECARRGVAVA
101: NAAGVYSSDV ADHAVGLLID VLRRVSVADR YVRRGLCPER GDFLPLGSRL RGKRVGVVGL GSIGSAVARR LEVFGCVVSY HSRGRKHDVS YCYHPAVRDL
201: AACSDVLVVA CALTAETRHV VDRRVLDALG SGGVVVNVAR GPNVDEAELV RALAEGRLAG AGLDVFEGEP DVPAEMLAMD NVVLTPHRAA FTPESIADLD
301: RLVAGNLEAF FAGAPLLTPV VVSD

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.