Factsheet for Solyc01g093990.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P17980_001	Banana	cytosol	18.58	56.07
AT2G45630.2	Thale cress	plastid	58.2	55.62
Solyc08g080030.2.1	Tomato	cytosol	46.13	55.19
HORVU2Hr1G005210.2	Barley	mitochondrion	45.82	53.43
KRH48312	Soybean	cytosol	54.8	52.52
KRH48313	Soybean	cytosol	53.56	51.49
KRH48310	Soybean	cytosol	51.08	49.4
KRH48311	Soybean	cytosol	50.46	48.8
GSMUA_Achr5P14420_001	Banana	cytosol	49.85	48.79
GSMUA_Achr5P14430_001	Banana	mitochondrion	45.2	48.03
Os04t0107200-01	Rice	mitochondrion	48.61	47.72
HORVU4Hr1G086940.2	Barley	cytosol	18.89	47.29
TraesCS2A01G034900.1	Wheat	mitochondrion	46.75	46.6
TraesCS2B01G048100.1	Wheat	plastid	49.54	46.51
Zm00001d024906_P001	Maize	cytosol	47.37	46.5
KRH65201	Soybean	plastid	41.18	46.34
TraesCS2D01G034600.1	Wheat	mitochondrion	47.06	46.06
Solyc03g120680.2.1	Tomato	nucleus	44.27	45.98
TraesCS2A01G035400.1	Wheat	mitochondrion	46.75	45.76
TraesCS2B01G048000.1	Wheat	mitochondrion	45.51	45.37
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	46.75	45.21
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	46.75	45.21
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	45.82	44.98
KRH65202	Soybean	cytosol	31.27	44.89
EES11740	Sorghum	mitochondrion	45.82	44.85
TraesCS2D01G034100.1	Wheat	mitochondrion	44.89	44.75
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	43.03	44.41
EES10352	Sorghum	cytosol, mitochondrion	46.44	44.38
EES10400	Sorghum	cytosol	46.44	44.38
Os04t0107500-01	Rice	plasma membrane	43.34	44.3
OQU81061	Sorghum	plastid	43.65	44.2
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	43.65	44.2
Solyc12g044250.1.1	Tomato	vacuole	43.03	44.13
Zm00001d018790_P001	Maize	extracellular, plasma membrane	42.72	44.09
EES11738	Sorghum	cytosol	46.13	44.08
Zm00001d024907_P001	Maize	mitochondrion	45.82	43.92
TraesCS2B01G048500.1	Wheat	cytosol	45.82	43.92
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	42.72	43.67
OQU81058	Sorghum	cytosol	45.2	43.58
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	46.13	43.44
TraesCS2D01G030900.1	Wheat	cytosol	42.41	43.35
TraesCS7A01G538500.1	Wheat	cytosol	46.13	43.31
TraesCS7B01G456600.1	Wheat	cytosol, plastid	46.13	43.31
OQU88433	Sorghum	cytosol	43.03	43.3
Os04t0107300-01	Rice	mitochondrion, plasma membrane	43.65	43.25
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	48.3	43.09
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	42.11	43.04
Zm00001d008883_P001	Maize	mitochondrion	43.34	42.42
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	42.41	42.41
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	42.41	42.41
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	60.37	42.3
TraesCS2D01G034300.1	Wheat	plastid	47.37	42.27
Solyc12g044260.1.1	Tomato	cytosol	40.87	42.17
Zm00001d004451_P001	Maize	cytosol	43.96	42.14
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	45.82	41.46
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	42.72	41.19
Os11t0229100-01	Rice	extracellular	16.41	38.13
HORVU2Hr1G005150.2	Barley	plastid	37.77	34.17
Solyc03g120660.2.1	Tomato	cytosol	16.41	33.54
Solyc11g020060.1.1	Tomato	cytosol	19.5	22.42
Solyc02g086880.2.1	Tomato	plastid	25.08	21.26
Solyc01g111630.2.1	Tomato	nucleus, plastid	24.15	20.21
Solyc03g044670.1.1	Tomato	cytosol	14.24	19.17
Solyc10g049890.1.1	Tomato	plastid	25.39	13.78
Solyc03g112070.2.1	Tomato	plastid	25.39	13.67
Solyc03g123830.2.1	Tomato	plastid	23.84	12.28

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618
GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	UniProt:K4AZE0	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF155	SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:Solyc01g093990.2
EnsemblPlants:Solyc01g093990.2.1	UniParc:UPI00027685C2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:85567942..85569709

Molecular Weight (calculated)

35740.6 Da

IEP (calculated)

6.704

GRAVY (calculated)

0.164

Length

323 amino acids

Sequence
(BLAST)

001: MSEAKSELPE VIVVGRPTIF KFYDEELSKK YRMLKSWESS LALENYICKH GQSVKAMICS PSHLGIQISS SLFRLLPSLR LIVTTSTGLD HIDLVECRRR
101: GISIASAATL FSEDVADFAV GLLIDVVRRI SAAHRFVNNG LWGQFPLGSK VGSRKIGIVG LGSIGLKVAQ RLEAFGCTIS YQSRNKKPVP YPFYHDVYEL
201: ATNCDVLVIC CALTDQTHHL INKEVLRTLG KKGVIINIAR GAIINEMELV QCLEEGEIAG AGLDVFENEP NVPKELLSLD NVVLTRHIAF LTEDSMRAMY
301: ELVCGNLEAF FLNKPVLSPV LDD

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.