Factsheet for Zm00001d024906_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10352	Sorghum	cytosol, mitochondrion	83.59	81.36
HORVU2Hr1G005210.2	Barley	mitochondrion	63.53	75.45
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	75.38	74.25
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	73.86	72.75
TraesCS2A01G035400.1	Wheat	mitochondrion	72.64	72.42
TraesCS2D01G034600.1	Wheat	mitochondrion	72.34	72.12
TraesCS2B01G048500.1	Wheat	cytosol	70.82	69.14
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	72.04	69.1
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	69.0	69.0
Zm00001d024907_P001	Maize	mitochondrion	70.21	68.55
Zm00001d004451_P001	Maize	cytosol	69.6	67.95
HORVU4Hr1G086940.2	Barley	cytosol	25.53	65.12
GSMUA_Achr4P17980_001	Banana	cytosol	19.76	60.75
Zm00001d008883_P001	Maize	mitochondrion	60.79	60.61
GSMUA_Achr5P14420_001	Banana	cytosol	58.36	58.18
GSMUA_Achr5P14430_001	Banana	mitochondrion	51.67	55.92
Solyc08g080030.2.1	Tomato	cytosol	44.38	54.07
Zm00001d018790_P001	Maize	extracellular, plasma membrane	51.06	53.67
PGSC0003DMT400058518	Potato	cytosol	22.49	53.24
PGSC0003DMT400058520	Potato	cytosol	50.76	51.38
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	44.07	50.0
Bra026966.1-P	Field mustard	cytosol	35.87	49.37
CDY54697	Canola	mitochondrion	22.19	49.32
CDY26572	Canola	cytosol	35.87	48.96
VIT_02s0025g04730.t01	Wine grape	cytosol	47.11	48.9
CDY57070	Canola	cytosol	47.42	48.45
AT2G45630.2	Thale cress	plastid	49.24	47.93
Solyc01g093990.2.1	Tomato	cytosol	46.5	47.37
Bra035498.1-P	Field mustard	cytosol	13.98	46.94
CDY17092	Canola	cytosol	14.89	46.23
Bra019774.1-P	Field mustard	cytosol	48.33	46.09
CDX98054	Canola	cytosol	48.33	46.09
CDY16011	Canola	cytosol, peroxisome, plastid	41.34	45.95
KRH48312	Soybean	cytosol	46.81	45.7
Zm00001d030544_P001	Maize	cytosol, extracellular	43.77	45.0
KRH48311	Soybean	cytosol	44.98	44.31
CDY26571	Canola	plastid	38.91	43.24
CDY16012	Canola	cytosol, nucleus, peroxisome	31.61	43.15
KRH48313	Soybean	cytosol	43.77	42.86
KRH48310	Soybean	cytosol	43.47	42.81
KRH65202	Soybean	cytosol	27.96	40.89
KRH65201	Soybean	plastid	34.04	39.02
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	52.28	37.31
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	37.99	31.49
CDY16010	Canola	cytosol, nucleus, plastid	47.72	28.49
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	22.49	26.24
Zm00001d011367_P001	Maize	cytosol	22.8	25.95
Zm00001d011368_P001	Maize	cytosol	22.8	25.95
Zm00001d053924_P001	Maize	cytosol	18.54	25.85
CDY26570	Canola	cytosol	34.95	25.56
Zm00001d014163_P001	Maize	mitochondrion	18.24	24.79
Zm00001d045965_P001	Maize	mitochondrion	25.23	22.07
Zm00001d004323_P001	Maize	mitochondrion	9.12	20.69
Zm00001d019818_P001	Maize	mitochondrion	8.81	20.0
Zm00001d014919_P002	Maize	mitochondrion	25.84	19.68
Zm00001d005489_P006	Maize	mitochondrion	22.8	19.18
Zm00001d033618_P001	Maize	cytosol	21.28	18.18
Zm00001d046923_P001	Maize	plastid	27.96	15.62
Zm00001d002051_P001	Maize	plastid	28.27	14.86
Zm00001d026472_P001	Maize	plastid	27.36	14.71
Zm00001d032114_P001	Maize	plastid	27.96	13.96
Zm00001d017801_P001	Maize	mitochondrion	6.99	13.37

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1D6J2N4	ProteinID:AQK42301.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0008423724
EnsemblPlantsGene:Zm00001d024906	EnsemblPlants:Zm00001d024906_P001	EnsemblPlants:Zm00001d024906_T001	SEG:seg	:	:

Description

Glyoxylate/hydroxypyruvate reductase HPR3

Coordinates

chr10:-:94248547..94249743

Molecular Weight (calculated)

34948.1 Da

IEP (calculated)

8.019

GRAVY (calculated)

0.225

Length

329 amino acids

Sequence
(BLAST)

001: MASSSEPSAL PTLLVFRVRE LRFLAALRER YRVLDFFTSG SPLAAFLAAA AGGADPPRAL VTVGGDSVRV DAALLDAVPS LRFVHSTGAG LDHIDLGECA
101: RRGVGVASSG TVYSTDVADH AVGLLVDVLR RVSAADRFVR RGLWPLHGDY PLGSKLGGKR VGIIGLGNIG TLIAKRLAAF GCVICYSSRK PKESVSYRYF
201: PSVHDLASES DVLVVACALT RETRHIVNKD VLAALGKDGV VVNIGRGPNI DEAELVAALK EGRIAGAGLD VFDKEPKVPA ELFSMDNVVL THHVAVFTTE
301: SRSDLRDVTI SNLEAFFAGR PLLNPVLHS

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.