CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024906_P001	Maize	cytosol	81.36	83.59
HORVU2Hr1G005210.2	Barley	mitochondrion	63.02	76.9
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	73.08	73.95
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	71.89	72.75
EES11738	Sorghum	cytosol	71.89	71.89
TraesCS2A01G035400.1	Wheat	mitochondrion	70.12	71.82
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	69.23	71.12
OQU81058	Sorghum	cytosol	70.41	71.04
TraesCS2D01G034600.1	Wheat	mitochondrion	69.23	70.91
TraesCS2B01G048500.1	Wheat	cytosol	67.75	67.95
EES10400	Sorghum	cytosol	67.75	67.75
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	68.64	67.64
EES11740	Sorghum	mitochondrion	63.91	65.45
HORVU4Hr1G086940.2	Barley	cytosol	24.56	64.34
GSMUA_Achr4P17980_001	Banana	cytosol	19.53	61.68
GSMUA_Achr5P14420_001	Banana	cytosol	55.33	56.67
GSMUA_Achr5P14430_001	Banana	mitochondrion	50.59	56.25
Solyc08g080030.2.1	Tomato	cytosol	42.6	53.33
PGSC0003DMT400058518	Potato	cytosol	21.89	53.24
PGSC0003DMT400058520	Potato	cytosol	49.7	51.69
OQU88433	Sorghum	cytosol	48.22	50.78
CDY54697	Canola	mitochondrion	21.89	50.0
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	42.9	50.0
Bra026966.1-P	Field mustard	cytosol	34.91	49.37
CDY57070	Canola	cytosol	46.75	49.07
CDY26572	Canola	cytosol	34.91	48.96
OQU81061	Sorghum	plastid	45.56	48.28
VIT_02s0025g04730.t01	Wine grape	cytosol	45.27	48.27
KXG31500	Sorghum	cytosol	44.97	48.25
CDY17092	Canola	cytosol	15.09	48.11
Bra035498.1-P	Field mustard	cytosol	13.91	47.96
AT2G45630.2	Thale cress	plastid	47.34	47.34
CDX98054	Canola	cytosol	47.63	46.67
Bra019774.1-P	Field mustard	cytosol	47.63	46.67
KRH48312	Soybean	cytosol	46.45	46.59
Solyc01g093990.2.1	Tomato	cytosol	44.38	46.44
CDY16011	Canola	cytosol, peroxisome, plastid	39.05	44.59
KRH48313	Soybean	cytosol	43.49	43.75
KRH48311	Soybean	cytosol	42.9	43.41
CDY26571	Canola	plastid	37.57	42.91
CDY16012	Canola	cytosol, nucleus, peroxisome	30.18	42.32
KRH65202	Soybean	cytosol	27.51	41.33
KRH48310	Soybean	cytosol	40.83	41.32
KRH65201	Soybean	plastid	31.95	37.63
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.89	37.31
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	35.21	29.97
CDY16010	Canola	cytosol, nucleus, plastid	47.04	28.86
CDY26570	Canola	cytosol	34.02	25.56
KXG29243	Sorghum	cytosol	24.56	21.78
EER89775	Sorghum	mitochondrion	23.08	20.74
EES07384	Sorghum	mitochondrion	22.78	20.05
KXG34859	Sorghum	mitochondrion, plastid	21.6	19.01
EER96197	Sorghum	mitochondrion	21.01	18.44
EER90146	Sorghum	mitochondrion, plastid	27.22	15.01
EES12983	Sorghum	plastid	26.92	14.68
EES15079	Sorghum	plastid	25.44	13.89

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:C5YBK8	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	EnsemblPlants:EES10352
ProteinID:EES10352	ProteinID:EES10352.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179
EnsemblPlantsGene:SORBI_3006G004700	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0003C66BB1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:788504..790152

Molecular Weight (calculated)

36495.0 Da

IEP (calculated)

7.282

GRAVY (calculated)

0.106

Length

338 amino acids

Sequence
(BLAST)

001: MAMASSELPT LLVFRVRELR FHAALRERYR VLDFLTSGEP LPAFLAAAAA ADPPRAALVV GGDSARVDAA FLDAVPSLRF VFSTGAGLDH IDLAECARRG
101: VAVANSGTVY STDVADHAVG MLIDVLRRVS AAQRFLRRGL WPLHHHQGND YHHHPHGHPL GTKVGGKRVG IIGLGNIGML IAKRLEAFGC VISYNSRKPK
201: ESVVSYRYFA SVHDMASESD VLVVACALSK ETRHVVNKDV LDALGKDGVV INIGRGLNVD EAELVSALEE GRIAGAGLDV YEKEPKVPAE LFAMDNVVLT
301: HHCAAFTMES RSDLRDVAIG NLEAFFSGKP LLTPVLHR

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.