CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018790_P001	Maize	extracellular, plasma membrane	84.11	86.26
OQU81061	Sorghum	plastid	76.32	76.8
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	71.34	72.47
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	71.03	72.15
TraesCS2D01G030900.1	Wheat	cytosol	70.72	71.84
Os04t0107500-01	Rice	plasma membrane	70.72	71.84
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	71.34	68.36
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	67.29	67.71
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	67.91	61.06
CDY17092	Canola	cytosol	18.69	56.6
Bra035498.1-P	Field mustard	cytosol	17.13	56.12
CDY54697	Canola	mitochondrion	25.55	55.41
GSMUA_Achr4P17980_001	Banana	cytosol	18.38	55.14
Solyc08g080030.2.1	Tomato	cytosol	44.24	52.59
EES11740	Sorghum	mitochondrion	53.89	52.42
PGSC0003DMT400058518	Potato	cytosol	22.12	51.08
GSMUA_Achr5P14420_001	Banana	cytosol	51.71	50.3
CDY57070	Canola	cytosol	50.16	50.0
GSMUA_Achr5P14430_001	Banana	mitochondrion	46.73	49.34
KXG31500	Sorghum	cytosol	47.98	48.89
EES10352	Sorghum	cytosol, mitochondrion	50.78	48.22
CDY26572	Canola	cytosol	36.14	48.13
Bra026966.1-P	Field mustard	cytosol	35.83	48.12
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	43.3	47.93
PGSC0003DMT400058520	Potato	cytosol	47.98	47.38
Bra019774.1-P	Field mustard	cytosol	50.78	47.25
CDX98054	Canola	cytosol	50.78	47.25
EES11738	Sorghum	cytosol	49.53	47.04
OQU81058	Sorghum	cytosol	48.91	46.87
EES10400	Sorghum	cytosol	48.91	46.45
CDY16011	Canola	cytosol, peroxisome, plastid	42.68	46.28
VIT_02s0025g04730.t01	Wine grape	cytosol	44.55	45.11
AT2G45630.2	Thale cress	plastid	47.35	44.97
KRH48312	Soybean	cytosol	46.42	44.21
KRH48311	Soybean	cytosol	45.79	44.01
Solyc01g093990.2.1	Tomato	cytosol	43.3	43.03
CDY16012	Canola	cytosol, nucleus, peroxisome	31.46	41.91
CDY26571	Canola	plastid	38.63	41.89
KRH48313	Soybean	cytosol	43.61	41.67
KRH65202	Soybean	cytosol	28.66	40.89
KRH48310	Soybean	cytosol	42.06	40.42
KRH65201	Soybean	plastid	33.64	37.63
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	42.06	34.01
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	47.35	32.97
CDY16010	Canola	cytosol, nucleus, plastid	48.6	28.31
CDY26570	Canola	cytosol	35.2	25.11
EES07384	Sorghum	mitochondrion	25.86	21.61
EER89775	Sorghum	mitochondrion	24.3	20.74
KXG29243	Sorghum	cytosol	23.99	20.21
KXG34859	Sorghum	mitochondrion, plastid	22.74	19.01
EER96197	Sorghum	mitochondrion	22.12	18.44
EER90146	Sorghum	mitochondrion, plastid	28.35	14.85
EES12983	Sorghum	plastid	28.66	14.84
EES15079	Sorghum	plastid	26.79	13.89

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1W0W262	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU88433	ProteinID:OQU88433
ProteinID:OQU88433.1	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF147	EnsemblPlantsGene:SORBI_3002G032900
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0009DC8A8B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:3011956..3014621

Molecular Weight (calculated)

33414.6 Da

IEP (calculated)

5.721

GRAVY (calculated)

0.381

Length

321 amino acids

Sequence
(BLAST)

001: MPPEHAADGD KPLVLLAQPL FLNLAAALEG RYRFVLAGEA DAATAAEARV LLVPGLVPVP AELIDRFPAL ELVAATSVGL DHVDLAACRR RPGLAVTNAG
101: AAFSVDTADY AVGLVVAVLR RVAAAEAHLR RGAWATEGKY PLTSKVSGKR VGILGLGSIG ALVARRLAAF GCRIAYSSRA PKPWCPYEFH PTARALAAAS
201: DVLVLSCALT EETRRVVDRG VMEALGAGGV LVNVGRGGLV DEPELVRCLR EGVIGGAGLD VYEDEPEVPP ELLAMDNVVL SGHRAVLTAE SLRGVADLVA
301: GNLEAFFAGR PLLSPVTLST L

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.