Factsheet for HORVU2Hr1G005140.13

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	81.79	91.54
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	68.63	77.53
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	68.07	76.9
Zm00001d018790_P001	Maize	extracellular, plasma membrane	62.47	71.25
Os04t0107500-01	Rice	plasma membrane	60.5	68.35
OQU88433	Sorghum	cytosol	61.06	67.91
OQU81061	Sorghum	plastid	60.5	67.71
GSMUA_Achr4P17980_001	Banana	cytosol	17.93	59.81
PGSC0003DMT400058518	Potato	cytosol	22.69	58.27
Bra035498.1-P	Field mustard	cytosol	15.97	58.16
HORVU2Hr1G005210.2	Barley	mitochondrion	45.1	58.12
CDY17092	Canola	cytosol	17.09	57.55
CDY54697	Canola	mitochondrion	23.81	57.43
Solyc08g080030.2.1	Tomato	cytosol	42.3	55.93
HORVU4Hr1G086940.2	Barley	cytosol	20.17	55.81
GSMUA_Achr5P14420_001	Banana	cytosol	50.14	54.24
CDY57070	Canola	cytosol	48.74	54.04
GSMUA_Achr5P14430_001	Banana	mitochondrion	45.1	52.96
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	42.58	52.41
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	49.86	51.9
Bra026966.1-P	Field mustard	cytosol	34.17	51.05
Bra019774.1-P	Field mustard	cytosol	49.3	51.01
CDX98054	Canola	cytosol	49.3	51.01
CDY26572	Canola	cytosol	34.17	50.62
PGSC0003DMT400058520	Potato	cytosol	45.66	50.15
VIT_02s0025g04730.t01	Wine grape	cytosol	43.42	48.9
CDY16011	Canola	cytosol, peroxisome, plastid	40.06	48.31
KRH48312	Soybean	cytosol	44.26	46.88
AT2G45630.2	Thale cress	plastid	43.98	46.45
KRH48313	Soybean	cytosol	43.42	46.13
Solyc01g093990.2.1	Tomato	cytosol	41.46	45.82
KRH65202	Soybean	cytosol	28.29	44.89
KRH48311	Soybean	cytosol	41.74	44.61
CDY26571	Canola	plastid	36.13	43.58
KRH48310	Soybean	cytosol	39.78	42.52
CDY16012	Canola	cytosol, nucleus, peroxisome	28.57	42.32
KRH65201	Soybean	plastid	33.33	41.46
HORVU2Hr1G005150.2	Barley	plastid	38.66	38.66
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	39.78	35.77
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	44.82	34.71
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	43.98	32.3
HORVU6Hr1G017010.1	Barley	cytosol	9.24	30.84
CDY16010	Canola	cytosol, nucleus, plastid	46.5	30.13
CDY26570	Canola	cytosol	32.77	26.0
HORVU6Hr1G000650.2	Barley	peroxisome	12.32	22.8
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	20.17	19.1
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	21.01	18.84
HORVU7Hr1G111190.2	Barley	mitochondrion	26.33	17.8
HORVU2Hr1G113180.3	Barley	cytosol	19.33	15.23
HORVU6Hr1G000640.1	Barley	cytosol	12.61	14.85
HORVU1Hr1G056180.2	Barley	plastid	25.49	14.77

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A287GYH1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009853
GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G005140	EnsemblPlants:HORVU2Hr1G005140.13	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
PANTHER:PTHR10996	PANTHER:PTHR10996:SF147	SUPFAM:SSF51735	SUPFAM:SSF52283	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000B468BD7	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:11263053..11264416

Molecular Weight (calculated)

37618.5 Da

IEP (calculated)

4.961

GRAVY (calculated)

0.280

Length

357 amino acids

Sequence
(BLAST)

001: GRHRAGRLCF LVVGALFFPF AWLSSHYLPK PNPPPIEEMP PPAQTQADAS KPVVLLADPI IPEFELELSA RYTLLPLADV DADTAASALA LLTVQLPAVT
101: AELMGALPKL ELVLTSSVGV DHVDLAACRR RGIGVTNAGD AFSADAADYA VGLVIASLRR VAAADAYVRR GSWPAGGDYP LASKVSGKRV GIVGLGNIGS
201: RIARRLAAFG CVVSYNSRSP KPSVPYEFVP TVRDLASGSD VLVLCCALTE ETKHVVNREV MEALGKDGVL VNVGRGGLVD EPELVRCLRE GVIGGAGLDV
301: FESEPDVPPE LFSMDNVVLS AHRAVATPES IRDVIELVAG NLDAFFAGKP LLSPVQL

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.