Factsheet for HORVU7Hr1G111190.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G400800.1	Wheat	plastid	95.45	82.49
TraesCS7A01G496500.1	Wheat	plastid	95.27	82.19
TraesCS7D01G483800.1	Wheat	plastid	94.51	81.8
HORVU2Hr1G113180.3	Barley	cytosol	66.86	77.92
Zm00001d046923_P001	Maize	plastid	84.85	76.06
EER90146	Sorghum	mitochondrion, plastid	87.5	75.37
Os06t0655100-00	Rice	plastid	88.83	74.09
HORVU1Hr1G056180.2	Barley	plastid	76.89	65.91
KRH23702	Soybean	extracellular	66.86	60.24
HORVU4Hr1G086940.2	Barley	cytosol	7.39	30.23
HORVU6Hr1G017010.1	Barley	cytosol	5.87	28.97
HORVU2Hr1G005210.2	Barley	mitochondrion	14.77	28.16
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	17.8	26.33
HORVU6Hr1G000650.2	Barley	peroxisome	9.09	24.87
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	15.34	23.62
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	14.39	20.16
HORVU2Hr1G005150.2	Barley	plastid	13.45	19.89
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	14.77	19.6
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	15.72	17.08
HORVU6Hr1G000640.1	Barley	cytosol	9.28	16.17

Protein Annotations

KEGG:00260+1.1.1.95	KEGG:00680+1.1.1.95	Gene3D:3.30.1330.90	Gene3D:3.30.70.260	Gene3D:3.40.50.720	MapMan:4.1.4.1.1
UniProt:A0A287XTN1	InterPro:ACT_dom	InterPro:ASB_dom_sf	ncoils:Coil	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004617
GO:GO:0005488	GO:GO:0006564	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G111190
EnsemblPlants:HORVU7Hr1G111190.2	InterPro:IPR002912	InterPro:IPR029009	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF01842
PFAM:PF02826	InterPro:PGDH	ScanProsite:PS00065	ScanProsite:PS00670	PFscan:PS51671	PANTHER:PTHR42938
PANTHER:PTHR42938:SF4	SUPFAM:SSF143548	SUPFAM:SSF51735	SUPFAM:SSF52283	SUPFAM:SSF55021	TIGRFAMs:TIGR01327
UniParc:UPI000B46FAEF	SEG:seg	:	:	:	:

Description

D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287XTN1]

Coordinates

chrchr7H:+:632754701..632757491

Molecular Weight (calculated)

54248.9 Da

IEP (calculated)

5.761

GRAVY (calculated)

0.217

Length

528 amino acids

Sequence
(BLAST)

001: ILLRSXXXXX XXXXXXXXXL RAKVSLVDAL VVRSATRVTR EVFEAARGRL RVVGRAGVGI DNVDLQAATE AGCLVVNAPT ANTVAAAEHA VALLAAMARN
101: VAQADASLKS GKWQRSKYVG VSLVGKTIAI MGFGKVGSEV ARRAKGLGMD VIAHDPYAPV DRARAIGVDL VSFDDAISTA DFISLHMPLT PSTTKLFNDE
201: TFAKMTKGVR IINVARGGVV DEEALLRALD NGTVAQAALD VFFEEPPPKD SKLVHHENVT VTPHLGASTT EAQEGVALEI AEAVIGALRG ELAATAVNAP
301: MVSAEVLAEL SPYVILAEKL GRLAVQLVAG GSGIKAVKVV YSSARDPDDL DTRILRAMVT KGIVEPISSA FVNMVNADYV AKQRGLRIIE ERILLDGSPE
401: VPINSIQVQL ANVESKFAGA LSDDGDIRVE GKVKDGTPHL TLVGPFSVDV SLEGNLILCR QVDQPGIIGK VGSILGTMNL NVNFMSVGRI APGKQAIMAI
501: GIDEEPEKEA LKLIGETPSV QEFVFLKL

Best Arabidopsis Sequence Match ( AT4G34200.1 )
(BLAST)

001: MSATAAASSS IAVATNSLRN VTLSSRSPLP SAISVAFPSR GRNTLQRRLV LVSCSTGDGS KPTILVAEKL GDAGIKLLED VANVDCSYNM TPEELNIKIS
101: LCDALIVRSG TKVGREVFES SHGRLKVVGR AGVGIDNVDL SAATEFGCLV VNAPTANTIA AAEHGIALMA AMARNVAQAD ASVKAGEWKR NKYVGVSLVG
201: KTLAVLGFGK VGTEVARRAK GLGMRVIAHD PYAPADRAHA IGVDLVSFDE ALATADFISL HMPLTPTTSK ILNDETFAKM KKGVRIVNVA RGGVIDEDAL
301: VRALDAGIVA QAALDVFTKE PPAKDSKLVQ HERVTVTPHL GASTMEAQEG VAIEIAEAVV GALNGELAAT AVNAPMVSAE VLTELKPYVV LAEKLGRLAV
401: QLVAGGSGVK NAKITYASAR ATDDLDTRLL RAMITKGIIE PISDVYVNLV NADFTAKQRG LRLSEERVLL DGSPESPLET ITVQLSNVES KFASSLSESG
501: EVKVEGKVKD GVPHLTKVGS FEVDVTLEGS IILCRQVDQP GMIGTVGSIL GESNVNVNFM SVGRIAPRKQ AIMAIGVDDI PSKETLKKIG EIPAVEEFVF
601: LKL

Arabidopsis Description

PGDH1D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UWV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.