Factsheet for HORVU5Hr1G050350.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	91.21	96.03
TraesCS5A01G161300.1	Wheat	plastid	90.95	95.77
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	90.45	95.24
TraesCS7B01G373500.1	Wheat	cytosol	23.62	90.38
Os07t0264100-01	Rice	mitochondrion	74.12	78.88
Os07t0263400-00	Rice	cytosol	55.03	77.11
KXG34859	Sorghum	mitochondrion, plastid	72.61	75.26
Zm00001d005489_P006	Maize	mitochondrion	72.86	74.17
GSMUA_Achr3P21910_001	Banana	cytosol	58.29	68.04
Solyc11g020060.1.1	Tomato	cytosol	43.47	61.57
PGSC0003DMT400071027	Potato	cytosol	46.98	60.71
VIT_18s0041g01830.t01	Wine grape	cytosol	51.76	60.06
PGSC0003DMT400085920	Potato	mitochondrion	26.38	57.07
AT1G72190.1	Thale cress	mitochondrion	51.76	55.23
KRH62463	Soybean	mitochondrion	53.27	54.22
Bra003888.1-P	Field mustard	mitochondrion	50.0	53.49
CDX68275	Canola	mitochondrion	50.0	53.49
CDY50445	Canola	mitochondrion	50.0	53.35
Solyc03g044670.1.1	Tomato	cytosol	28.64	47.5
HORVU2Hr1G005210.2	Barley	mitochondrion	17.59	25.27
HORVU4Hr1G086940.2	Barley	cytosol	7.54	23.26
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	19.35	22.45
HORVU6Hr1G017010.1	Barley	cytosol	5.78	21.5
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	18.84	21.01
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	19.1	20.16
HORVU2Hr1G005150.2	Barley	plastid	15.83	17.65
HORVU6Hr1G000650.2	Barley	peroxisome	7.79	16.06
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	19.1	15.64
HORVU2Hr1G113180.3	Barley	cytosol	16.83	14.79
HORVU7Hr1G111190.2	Barley	mitochondrion	19.6	14.77
HORVU6Hr1G000640.1	Barley	cytosol	10.8	14.19
HORVU1Hr1G056180.2	Barley	plastid	21.61	13.96

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A287R5W0	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_NAD-bd
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G050350	EnsemblPlants:HORVU5Hr1G050350.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF2
SUPFAM:SSF51735	SUPFAM:SSF52283	SignalP:SignalP-noTM	UniParc:UPI000B468473	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:391508155..391531024

Molecular Weight (calculated)

43408.9 Da

IEP (calculated)

8.710

GRAVY (calculated)

0.070

Length

398 amino acids

Sequence
(BLAST)

001: SPSPPPNQTR LAALLSLSYI MAGARSAAIR LTHSSLFLLS RAAAAAATRR THLPPSSRDY SKMASSVGIN GYSAVTRVLF CGHYWPASTI YTKEYLQKYP
101: FIQVDEVGLE HVPDVIQNYH ICVVKNKCID SDIIAKATKM KIIMQYGVGL EGVDINAATE HKIKVARIPG STTGNATACA EMAIYLTLGV LRKQKEMDAA
201: VIRKDLGLPV GETIFGKTIL ILGFGAIGME IAKRLRPFGV KILATKRNWS SNTVSCDLDG LVDKKGGPED MYELAREADI VITCMTLNNE SVGIVNHKFL
301: SALKKGSYLI NIARGRLLDY TAVFNHLESG HLGGLGIDVA WTEPFDPEDP ILKFPNVIIT PHIAGITEYS YRTMAKVVGD VALKLHAGEP FNEIEFVN

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.