Factsheet for Solyc03g044670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g020060.1.1	Tomato	cytosol	82.08	70.11
PGSC0003DMT400071027	Potato	cytosol	79.58	62.01
TraesCS7B01G373500.1	Wheat	cytosol	20.42	47.12
VIT_18s0041g01830.t01	Wine grape	cytosol	56.67	39.65
GSMUA_Achr3P21910_001	Banana	cytosol	52.5	36.95
Os07t0263400-00	Rice	cytosol	42.92	36.27
CDX68275	Canola	mitochondrion	52.92	34.14
CDY50445	Canola	mitochondrion	52.92	34.05
AT1G72190.1	Thale cress	mitochondrion	52.08	33.51
Bra003888.1-P	Field mustard	mitochondrion	51.67	33.33
KRH62463	Soybean	mitochondrion	53.33	32.74
EER96197	Sorghum	mitochondrion	49.17	30.65
Os07t0264100-01	Rice	mitochondrion	47.5	30.48
KXG34859	Sorghum	mitochondrion, plastid	47.92	29.95
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	47.08	29.89
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	46.67	29.63
TraesCS5A01G161300.1	Wheat	plastid	46.67	29.63
Zm00001d005489_P006	Maize	mitochondrion	47.5	29.16
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	47.5	28.64
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	22.92	17.57
Solyc03g120680.2.1	Tomato	nucleus	22.5	17.36
Solyc12g044260.1.1	Tomato	cytosol	22.5	17.25
Solyc12g044250.1.1	Tomato	vacuole	22.5	17.14
Solyc08g080030.2.1	Tomato	cytosol	19.17	17.04
Solyc02g086880.2.1	Tomato	plastid	25.83	16.27
Solyc03g120660.2.1	Tomato	cytosol	10.42	15.82
Solyc01g093990.2.1	Tomato	cytosol	19.17	14.24
Solyc01g111630.2.1	Tomato	nucleus, plastid	19.17	11.92
Solyc10g049890.1.1	Tomato	plastid	23.75	9.58
Solyc03g112070.2.1	Tomato	plastid	23.75	9.5
Solyc03g123830.2.1	Tomato	plastid	23.75	9.09

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	UniProt:K4BG85	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
PANTHER:PTHR42938	PANTHER:PTHR42938:SF2	SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:Solyc03g044670.1	EnsemblPlants:Solyc03g044670.1.1
UniParc:UPI000276853E	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:10339682..10340404

Molecular Weight (calculated)

25978.7 Da

IEP (calculated)

9.064

GRAVY (calculated)

-0.008

Length

240 amino acids

Sequence
(BLAST)

001: MNSDVHSRAK RMKLIMQFGV GLEGVDITAA TNHCIKVAKI SGGATGNAAS YAEMAIYLIL GLLRKQHQMK ISVEQKKLGE PTGVNLHGKT VFILGFGNIG
101: IHLAKRLRPF DVKILATKRS WGRPAQDSSK SEAPSVENGG YADLVDERGN HADILKFASK ADIVVCCLAM NNETIGIVNN DFISVMRKGV VLINIAQREE
201: DCPSLIKIPP ICHSFNTPPH AQCLASSAWA IFNFGDPNIG

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.