Factsheet for Solyc11g020060.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071027	Potato	cytosol	96.09	87.66
Solyc03g044670.1.1	Tomato	cytosol	70.11	82.08
VIT_18s0041g01830.t01	Wine grape	cytosol	69.39	56.85
GSMUA_Achr3P21910_001	Banana	cytosol	66.19	54.55
Os07t0263400-00	Rice	cytosol	51.96	51.41
CDY50445	Canola	mitochondrion	65.84	49.6
CDX68275	Canola	mitochondrion	65.48	49.46
AT1G72190.1	Thale cress	mitochondrion	65.12	49.06
Bra003888.1-P	Field mustard	mitochondrion	64.77	48.92
KRH62463	Soybean	mitochondrion	67.26	48.34
TraesCS7B01G373500.1	Wheat	cytosol	17.44	47.12
KXG34859	Sorghum	mitochondrion, plastid	63.35	46.35
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	61.92	46.03
Os07t0264100-01	Rice	mitochondrion	61.21	45.99
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	61.57	45.77
TraesCS5A01G161300.1	Wheat	plastid	61.57	45.77
EER96197	Sorghum	mitochondrion	61.92	45.19
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	61.57	43.47
Zm00001d005489_P006	Maize	mitochondrion	60.14	43.22
Solyc12g044260.1.1	Tomato	cytosol	27.4	24.6
Solyc08g080030.2.1	Tomato	cytosol	22.78	23.7
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	26.33	23.64
Solyc03g120680.2.1	Tomato	nucleus	25.62	23.15
Solyc12g044250.1.1	Tomato	vacuole	25.27	22.54
Solyc02g086880.2.1	Tomato	plastid	27.4	20.21
Solyc01g093990.2.1	Tomato	cytosol	22.42	19.5
Solyc03g120660.2.1	Tomato	cytosol	9.96	17.72
Solyc01g111630.2.1	Tomato	nucleus, plastid	23.49	17.1
Solyc03g123830.2.1	Tomato	plastid	28.83	12.92
Solyc10g049890.1.1	Tomato	plastid	27.05	12.77
Solyc03g112070.2.1	Tomato	plastid	26.69	12.5

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	UniProt:K4D6V9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF2	SUPFAM:SSF51735	SUPFAM:SSF52283
EnsemblPlantsGene:Solyc11g020060.1	EnsemblPlants:Solyc11g020060.1.1	UniParc:UPI0002769391	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:-:10030115..10034259

Molecular Weight (calculated)

30118.9 Da

IEP (calculated)

8.812

GRAVY (calculated)

0.102

Length

281 amino acids

Sequence
(BLAST)

001: MNSDVLSRAK RMKLIMQFGV GLEGVDITAA TKHGIKVAKI PGGATGNAAS CAEMAIYLIL GLLRKQHQMK ISVEQKKLGE PTGVNLQGKT VFILGFGNIG
101: IHLAKRLRPF DVKILATKRS WGRPAQDSSK SEAPSVENGG YADLVDERGN HADILKFASK ADIVVCCLAM NNETIGIVNN DFISVMRKGA ILINIARGGL
201: LDYDAVLSHL KSGHLGGLGI DVAWTEPFDP DDAILRFPDV IITPHVAGVT ELSYRDMAKV VGDVALQLHA GKPFTGIEIV N

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.