Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 63.29 | 31.95 |
| Solyc12g044250.1.1 | Tomato | vacuole | 60.76 | 30.48 |
| Solyc12g044260.1.1 | Tomato | cytosol | 60.13 | 30.35 |
| Solyc03g120680.2.1 | Tomato | nucleus | 53.16 | 27.01 |
| CDY26572 | Canola | cytosol | 32.91 | 21.58 |
| CDY16012 | Canola | cytosol, nucleus, peroxisome | 31.65 | 20.75 |
| AT1G12550.1 | Thale cress | cytosol | 37.34 | 18.27 |
| CDY16011 | Canola | cytosol, peroxisome, plastid | 33.54 | 17.91 |
| CDY57070 | Canola | cytosol | 36.08 | 17.7 |
| CDY26571 | Canola | plastid | 32.91 | 17.57 |
| CDX98054 | Canola | cytosol | 37.34 | 17.1 |
| Solyc01g093990.2.1 | Tomato | cytosol | 33.54 | 16.41 |
| Solyc08g080030.2.1 | Tomato | cytosol | 25.32 | 14.81 |
| CDY26570 | Canola | cytosol | 31.65 | 11.11 |
| Solyc03g044670.1.1 | Tomato | cytosol | 15.82 | 10.42 |
| Solyc11g020060.1.1 | Tomato | cytosol | 17.72 | 9.96 |
| CDY16010 | Canola | cytosol, nucleus, plastid | 34.18 | 9.8 |
| Solyc01g111630.2.1 | Tomato | nucleus, plastid | 22.78 | 9.33 |
| Solyc02g086880.2.1 | Tomato | plastid | 18.35 | 7.61 |
| Solyc03g112070.2.1 | Tomato | plastid | 24.68 | 6.5 |
| Solyc10g049890.1.1 | Tomato | plastid | 22.15 | 5.88 |
| Solyc03g123830.2.1 | Tomato | plastid | 21.52 | 5.42 |
| CDY54697 | Canola | mitochondrion | 3.8 | 4.05 |
| CDY17092 | Canola | cytosol | 0.0 | 0.0 |
| Bra035498.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | InterPro:D-isomer_2_OHA_DH_cat_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0016618 | GO:GO:0030267 | GO:GO:0051287 |
| GO:GO:0055114 | UniProt:K4BML5 | PFAM:PF00389 | PANTHER:PTHR10996 | PANTHER:PTHR10996:SF139 | SUPFAM:SSF52283 |
| EnsemblPlantsGene:Solyc03g120660.2 | EnsemblPlants:Solyc03g120660.2.1 | UniParc:UPI0002766D72 | : | : | : |
Description
No Description!
Coordinates
chr3:+:68983804..68985674
Molecular Weight (calculated)
17531.5 Da
IEP (calculated)
8.480
GRAVY (calculated)
-0.015
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MTCPMSPYLE QELDKRFNFL RLWKFPENQK SHFLKLHSDS IRGVVGNATI GANAELIGAL PKLEIVSSYS VGLDKIDLGL CKEKGIKVAY CPDLITDDAA
101: DTGVALILAV LRRICQCDSY VKNGLWKNGD FMLTSKVTGG SIGLHQQYHA LLPHILRK
101: DTGVALILAV LRRICQCDSY VKNGLWKNGD FMLTSKVTGG SIGLHQQYHA LLPHILRK
001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKVCNIT CEKIKLATKM IVNGSL
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKVCNIT CEKIKLATKM IVNGSL
Arabidopsis Description
D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.