CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16010	Canola	cytosol, nucleus, plastid	93.33	76.22
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	64.22	72.8
CDY26571	Canola	plastid	44.44	67.57
CDY16011	Canola	cytosol, peroxisome, plastid	42.0	63.85
CDY26572	Canola	cytosol	34.0	63.49
CDY16012	Canola	cytosol, nucleus, peroxisome	31.33	58.51
CDY17092	Canola	cytosol	13.78	58.49
CDY57070	Canola	cytosol	40.89	57.14
CDX98054	Canola	cytosol	41.33	53.91
AT1G12550.1	Thale cress	cytosol	38.67	53.87
GSMUA_Achr4P17980_001	Banana	cytosol	10.67	44.86
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	27.33	42.41
GSMUA_Achr5P14430_001	Banana	mitochondrion	27.78	41.12
GSMUA_Achr5P14420_001	Banana	cytosol	29.33	40.0
CDY54697	Canola	mitochondrion	13.11	39.86
PGSC0003DMT400058520	Potato	cytosol	28.22	39.08
KRH48312	Soybean	cytosol	28.89	38.58
Os04t0107500-01	Rice	plasma membrane	26.44	37.66
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	27.78	37.43
Os11t0229100-01	Rice	extracellular	11.56	37.41
VIT_02s0025g04730.t01	Wine grape	cytosol	26.0	36.91
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	26.0	36.68
Zm00001d008883_P001	Maize	mitochondrion	26.89	36.67
TraesCS2A01G035400.1	Wheat	mitochondrion	26.89	36.67
HORVU2Hr1G005210.2	Barley	mitochondrion	22.44	36.46
TraesCS2D01G034600.1	Wheat	mitochondrion	26.67	36.36
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	26.89	36.23
CDX79406	Canola	cytosol	25.11	36.1
CDX67931	Canola	cytosol	25.11	36.1
TraesCS2D01G030900.1	Wheat	cytosol	25.33	36.08
EES11740	Sorghum	mitochondrion	26.44	36.06
Zm00001d018790_P001	Maize	extracellular, plasma membrane	24.89	35.78
KRH48313	Soybean	cytosol	26.44	35.42
Os04t0107200-01	Rice	mitochondrion	25.78	35.26
OQU88433	Sorghum	cytosol	25.11	35.2
TraesCS2B01G048000.1	Wheat	mitochondrion	25.33	35.19
TraesCS7A01G538500.1	Wheat	cytosol	26.89	35.17
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	24.67	35.13
OQU81061	Sorghum	plastid	24.89	35.11
TraesCS2B01G048500.1	Wheat	cytosol	26.22	35.01
Zm00001d024906_P001	Maize	cytosol	25.56	34.95
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	25.56	34.95
OQU81058	Sorghum	cytosol	26.0	34.93
TraesCS2A01G034900.1	Wheat	mitochondrion	25.11	34.88
KRH48310	Soybean	cytosol	25.78	34.73
TraesCS2D01G034100.1	Wheat	mitochondrion	24.89	34.57
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	24.22	34.49
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	24.67	34.37
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	24.67	34.37
Os04t0107300-01	Rice	mitochondrion, plasma membrane	24.89	34.36
TraesCS7B01G456600.1	Wheat	cytosol, plastid	26.22	34.3
CDX87280	Canola	cytosol	23.56	34.19
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	26.0	34.11
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	25.33	34.03
EES10352	Sorghum	cytosol, mitochondrion	25.56	34.02
KRH48311	Soybean	cytosol	25.11	33.83
KRH65201	Soybean	plastid	21.56	33.8
EES11738	Sorghum	cytosol	25.33	33.73
TraesCS2B01G048100.1	Wheat	plastid	25.78	33.72
Zm00001d024907_P001	Maize	mitochondrion	24.89	33.23
CDY58781	Canola	cytosol	23.11	33.23
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	26.0	32.77
EES10400	Sorghum	cytosol	24.44	32.54
PGSC0003DMT400058518	Potato	cytosol	10.0	32.37
Zm00001d004451_P001	Maize	cytosol	24.22	32.34
KRH65202	Soybean	cytosol	16.0	32.0
Solyc03g120660.2.1	Tomato	cytosol	11.11	31.65
TraesCS2D01G034300.1	Wheat	plastid	25.33	31.49
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	25.33	31.49
HORVU4Hr1G086940.2	Barley	cytosol	8.89	31.01
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	29.33	28.63
HORVU2Hr1G005150.2	Barley	plastid	16.22	20.45
CDY57736	Canola	plastid	13.56	16.01
CDY07405	Canola	cytosol	13.11	15.29
CDX85582	Canola	mitochondrion	12.89	15.14
CDY04198	Canola	cytosol	13.11	14.97
CDY09885	Canola	mitochondrion	12.44	14.62
CDX91020	Canola	mitochondrion	12.44	14.58
CDX69558	Canola	mitochondrion	12.44	14.58
CDX68275	Canola	mitochondrion	12.0	14.52
CDY50445	Canola	mitochondrion	12.0	14.48
CDX96054	Canola	mitochondrion	13.33	13.1
CDX96754	Canola	plastid	16.22	11.76
CDX83893	Canola	plastid	16.22	11.74
CDX76268	Canola	plastid	14.67	11.0
CDY49286	Canola	plastid	14.44	10.87
CDX72462	Canola	plastid	14.44	10.87
CDX75409	Canola	plastid	14.0	10.57
CDX82295	Canola	plastid	13.56	10.39
CDY22972	Canola	plastid	13.56	10.39
CDX69034	Canola	plastid	14.0	9.97
CDY01876	Canola	endoplasmic reticulum, plasma membrane	12.89	8.37
CDY12275	Canola	cytosol	4.89	6.43
CDY57737	Canola	cytosol	0.67	1.75

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:A0A078GJA2	UniProt:A0A078GJA2	EnsemblPlants:CDY26570	ProteinID:CDY26570
ProteinID:CDY26570.1	ncoils:Coil	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00035437001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EDDA01	SEG:seg

Description

BnaA09g47070DBnaA09g47070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJA2]

Coordinates

chrLK032192:+:189594..196061

Molecular Weight (calculated)

49693.8 Da

IEP (calculated)

7.040

GRAVY (calculated)

-0.053

Length

450 amino acids

Sequence
(BLAST)

001: MDFASSSADF AYENELDLSS LMTPSTFIPF QEPNPSIPTI HCAGAENDGR QRIRETTTTD EIITNEDILT RAWKARGKRS SSDHVQEAVN YIKDFEKKIK
101: EISLKRDRIK RSLSHSSSTG ECSIRSLESS YCSCDGDTHI NVKVRTCLVG IEIVASCCFR QESCLSSILQ LLVQEQCLDV VSCISSRLHP RFIHTIVCEI
201: VPSKSMAEES PLVLVHRPPT MKYMDEPLTR YYRILTTHTS SDPLPLFLSR HASSVRAVVS IGRFKIDAGF LSRLPSLQLI VCTSVGTDHV DLPECNRRGI
301: AVSNAGEAYS EDVADYAVGL LISFLRRIPA ADRYVRSGEW AKCGEFQLGI KLSGKRVGIL GLGSIGIPYL YYPDALGKKG IIINVGRGGL IDEKEMVKFP
401: VELFGLDNVV LSPHSAIATP GSFDNVVELA LANLKAFFSN QPLISPVRLN

Best Arabidopsis Sequence Match ( AT1G12540.1 )
(BLAST)

001: MNFPDSSLFT PNFAYENDLD FSSLITPSTR VSFQEPKPCN PVIHSAGIEN DGRQNCETTM TLSEIMKGDD EPKNKRAKHK ELERQRRQEN TSLFKILRYL
101: LPSQYIKGKR SSADHVLEAV NYIKDLQKKI KEVSEKRDRI KRSITHPSSR GEFSIRSLAS STCSCVGDTN IAVVVRPCLI GLEIVVSCCN RHESCLSSVL
201: QLLAQEQCFN IVSCISTRLH QGFIHTIASE VEEGIEVYFS ELQEKIIKIG TSRVTTR

Arabidopsis Description

BHLH55Transcription factor bHLH55 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.