Factsheet for Os04t0107200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G048100.1	Wheat	plastid	78.42	75.0
EES11740	Sorghum	mitochondrion	71.43	71.21
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	77.2	70.17
TraesCS2D01G034300.1	Wheat	plastid	75.08	68.23
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	68.09	68.09
Zm00001d008883_P001	Maize	mitochondrion	67.78	67.58
Os04t0107300-01	Rice	mitochondrion, plasma membrane	61.09	61.66
Os11t0229100-01	Rice	extracellular	24.92	58.99
GSMUA_Achr5P14430_001	Banana	mitochondrion	54.41	58.88
GSMUA_Achr4P17980_001	Banana	cytosol	19.15	58.88
GSMUA_Achr5P14420_001	Banana	cytosol	57.45	57.27
CDY54697	Canola	mitochondrion	25.23	56.08
Os04t0107500-01	Rice	plasma membrane	52.28	54.43
Bra026966.1-P	Field mustard	cytosol	39.51	54.39
CDY26572	Canola	cytosol	39.21	53.53
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	46.2	52.41
Solyc08g080030.2.1	Tomato	cytosol	42.86	52.22
CDY57070	Canola	cytosol	50.76	51.86
PGSC0003DMT400058518	Potato	cytosol	21.88	51.8
VIT_02s0025g04730.t01	Wine grape	cytosol	48.02	49.84
CDY16011	Canola	cytosol, peroxisome, plastid	44.68	49.66
Bra019774.1-P	Field mustard	cytosol	51.98	49.57
CDX98054	Canola	cytosol	51.98	49.57
AT2G45630.2	Thale cress	plastid	50.46	49.11
CDY17092	Canola	cytosol	15.81	49.06
KRH48312	Soybean	cytosol	50.15	48.96
HORVU2Hr1G005150.2	Barley	plastid	52.89	48.74
Solyc01g093990.2.1	Tomato	cytosol	47.72	48.61
Os01t0228600-01	Rice	extracellular	46.5	48.42
PGSC0003DMT400058520	Potato	cytosol	47.72	48.31
Bra035498.1-P	Field mustard	cytosol	14.29	47.96
CDY16012	Canola	cytosol, nucleus, peroxisome	34.65	47.3
CDY26571	Canola	plastid	41.64	46.28
KRH48313	Soybean	cytosol	46.5	45.54
KRH48311	Soybean	cytosol	44.68	44.01
KRH48310	Soybean	cytosol	42.25	41.62
KRH65202	Soybean	cytosol	28.27	41.33
KRH65201	Soybean	plastid	34.35	39.37
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	53.5	38.18
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	40.73	33.75
CDY16010	Canola	cytosol, nucleus, plastid	50.15	29.95
CDY26570	Canola	cytosol	35.26	25.78
Os07t0263400-00	Rice	cytosol	20.06	23.24
Os02t0101500-02	Rice	extracellular, mitochondrion	25.53	21.76
Os06t0486800-01	Rice	mitochondrion	24.32	21.28
Os06t0486900-01	Rice	mitochondrion	24.32	21.16
Os07t0264100-01	Rice	mitochondrion	23.71	20.86
Os04t0650800-01	Rice	plastid	27.36	14.68
Os08t0447000-01	Rice	plastid	26.44	14.01
Os06t0655100-00	Rice	plastid	26.14	13.59

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	ProteinID:BAF13929.1	ProteinID:BAS87544.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os04g0107200	EnsemblPlants:Os04t0107200-01	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF207
UniProt:Q0JFF8	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0000DD8F09	SEG:seg	:

Description

NAD(P)-binding domain containing protein. (Os04t0107200-01)

Coordinates

chr4:-:443167..444830

Molecular Weight (calculated)

34375.4 Da

IEP (calculated)

5.404

GRAVY (calculated)

0.335

Length

329 amino acids

Sequence
(BLAST)

001: VAAPPATGGK RPVLLLRRIN DRLAAELRSR FRVLNFYESS APLLAFLAAA AAGPDPPLAA VVVAGGAIQV NAAFLDAVPS LGCVVTTGAG VDHIDLAECA
101: RRGVAVAGAG TVFSTDVADH AVGLLVDVLR RISASDRYVR RGLWAARGDY PLGSKLSGKH VGIIGLGSIG SLIAKRLQAF GCTISYNSRR PKDSVSYNYF
201: PDVTDLAAAS DVLIVACALN DETRHIVDSS VLEALGKDGV VVNIARGGIV DEAELIRALK EGRIAGAGLD VFEKEPDVPA ELLSMDNVVL TAHEAVFTTE
301: SNWDLADLMI ANLEAFFSGG PLLTPVLPK

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.