CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26572	Canola	cytosol	80.5	80.5
CDY26571	Canola	plastid	69.29	56.42
CDY57070	Canola	cytosol	73.44	54.97
CDY16011	Canola	cytosol, peroxisome, plastid	67.22	54.73
CDX98054	Canola	cytosol	74.27	51.88
AT1G12550.1	Thale cress	cytosol	65.98	49.23
Os11t0229100-01	Rice	extracellular	24.48	42.45
CDY54697	Canola	mitochondrion	24.48	39.86
GSMUA_Achr5P14430_001	Banana	mitochondrion	45.23	35.86
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	42.74	35.52
Os04t0107200-01	Rice	mitochondrion	47.3	34.65
GSMUA_Achr5P14420_001	Banana	cytosol	47.3	34.55
HORVU2Hr1G005210.2	Barley	mitochondrion	39.42	34.3
EES11740	Sorghum	mitochondrion	46.89	34.24
Zm00001d008883_P001	Maize	mitochondrion	46.89	34.24
KRH48312	Soybean	cytosol	47.72	34.12
CDY16010	Canola	cytosol, nucleus, plastid	78.01	34.12
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	46.06	33.74
KRH48313	Soybean	cytosol	46.47	33.33
TraesCS2D01G034600.1	Wheat	mitochondrion	45.23	33.03
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	45.64	32.93
PGSC0003DMT400058520	Potato	cytosol	44.4	32.92
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	43.15	32.91
Os04t0107500-01	Rice	plasma membrane	43.15	32.91
KRH48311	Soybean	cytosol	45.23	32.63
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	45.23	32.63
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	42.74	32.59
TraesCS2D01G030900.1	Wheat	cytosol	42.74	32.59
TraesCS2A01G035400.1	Wheat	mitochondrion	44.4	32.42
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	42.74	32.29
TraesCS2B01G048100.1	Wheat	plastid	45.64	31.98
Solyc03g120660.2.1	Tomato	cytosol	20.75	31.65
Zm00001d018790_P001	Maize	extracellular, plasma membrane	41.08	31.63
Zm00001d024906_P001	Maize	cytosol	43.15	31.61
TraesCS2A01G034900.1	Wheat	mitochondrion	42.32	31.48
OQU88433	Sorghum	cytosol	41.91	31.46
KRH48310	Soybean	cytosol	43.57	31.44
EES11738	Sorghum	cytosol	43.98	31.36
OQU81061	Sorghum	plastid	41.49	31.35
CDY26570	Canola	cytosol	58.51	31.33
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	44.4	31.2
TraesCS2B01G048000.1	Wheat	mitochondrion	41.91	31.17
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	43.15	31.04
CDX67931	Canola	cytosol	40.25	30.99
CDX79406	Canola	cytosol	40.25	30.99
TraesCS2D01G034100.1	Wheat	mitochondrion	41.49	30.86
TraesCS2B01G048500.1	Wheat	cytosol	43.15	30.86
TraesCS7A01G538500.1	Wheat	cytosol	43.98	30.81
TraesCS7B01G456600.1	Wheat	cytosol, plastid	43.98	30.81
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	46.06	30.66
CDX87280	Canola	cytosol	39.42	30.65
VIT_02s0025g04730.t01	Wine grape	cytosol	40.25	30.6
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	40.66	30.34
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	40.66	30.34
Zm00001d024907_P001	Maize	mitochondrion	42.32	30.27
EES10352	Sorghum	cytosol, mitochondrion	42.32	30.18
OQU81058	Sorghum	cytosol	41.91	30.15
TraesCS2D01G034300.1	Wheat	plastid	45.23	30.11
Os04t0107300-01	Rice	mitochondrion, plasma membrane	40.66	30.06
CDY58781	Canola	cytosol	38.17	29.39
Zm00001d004451_P001	Maize	cytosol	41.08	29.38
EES10400	Sorghum	cytosol	41.08	29.29
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	42.32	28.57
KRH65201	Soybean	plastid	33.2	27.87
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	48.55	25.38
HORVU2Hr1G005150.2	Barley	plastid	28.63	19.33
KRH65202	Soybean	cytosol	16.6	17.78
CDX68275	Canola	mitochondrion	22.41	14.52
CDY50445	Canola	mitochondrion	22.41	14.48
CDX85582	Canola	mitochondrion	22.41	14.1
CDX91020	Canola	mitochondrion	21.99	13.8
CDY09885	Canola	mitochondrion	21.58	13.58
CDX69558	Canola	mitochondrion	21.58	13.54
CDY57736	Canola	plastid	21.16	13.39
CDY07405	Canola	cytosol	20.75	12.95
PGSC0003DMT400058518	Potato	cytosol	7.47	12.95
CDY04198	Canola	cytosol	20.75	12.69
CDX96054	Canola	mitochondrion	20.75	10.92
CDY49286	Canola	plastid	21.58	8.7
CDX72462	Canola	plastid	21.58	8.7
CDX75409	Canola	plastid	21.16	8.56
CDX82295	Canola	plastid	20.75	8.52
CDY22972	Canola	plastid	20.75	8.52
CDX76268	Canola	plastid	21.16	8.5
CDX96754	Canola	plastid	21.58	8.37
CDX83893	Canola	plastid	21.58	8.36
CDX69034	Canola	plastid	21.16	8.07
CDY17092	Canola	cytosol	3.32	7.55
CDY01876	Canola	endoplasmic reticulum, plasma membrane	20.75	7.22
HORVU4Hr1G086940.2	Barley	cytosol	3.73	6.98
GSMUA_Achr4P17980_001	Banana	cytosol	1.66	3.74
CDY12275	Canola	cytosol	2.9	2.05
CDY57737	Canola	cytosol	0.41	0.58

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078FT53	UniProt:A0A078FT53	EnsemblPlants:CDY16012	ProteinID:CDY16012
ProteinID:CDY16012.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090398001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996
PANTHER:PTHR10996:SF179	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EEC14D	SEG:seg	:

Description

BnaC08g41110DBnaC08g41110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT53]

Coordinates

chrLK032060:+:191616..192508

Molecular Weight (calculated)

26428.7 Da

IEP (calculated)

7.785

GRAVY (calculated)

-0.001

Length

241 amino acids

Sequence
(BLAST)

001: MSESPLVLVH RPPNLNFMDE LLSRNYRILN THTSSDPLPV FLSRQASSVR AFVNIALLKI DADLLSHLPS LQLIVCTSVG TNHVDLVECK RRGIAVTNAG
101: EAFSEDVADF AVGLLISVLR RIPAADRCVW SGNWAKFGNF QLGIKLSGKR VGILGLGSIG SLIAKRLEPF GCIISYNSTS QKQSIPYLYY PDVLSLAANN
201: DVIVLSCALN DQTHAPHCEQ RSDGGSWEER SYNQCGARRT D

Best Arabidopsis Sequence Match ( AT2G45630.1 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKVCNIT CEKIKLATKM IVNGSL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.