Factsheet for TraesCS2D01G034600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G035400.1	Wheat	mitochondrion	96.36	96.36
TraesCS2B01G048500.1	Wheat	cytosol	94.85	92.88
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	93.64	90.09
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	86.67	85.63
HORVU4Hr1G086940.2	Barley	cytosol	32.12	82.17
EES11738	Sorghum	cytosol	74.55	72.78
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	72.42	72.64
Zm00001d024906_P001	Maize	cytosol	72.12	72.34
EES10400	Sorghum	cytosol	71.82	70.12
Zm00001d004451_P001	Maize	cytosol	71.21	69.73
EES10352	Sorghum	cytosol, mitochondrion	70.91	69.23
GSMUA_Achr4P17980_001	Banana	cytosol	20.61	63.55
TraesCS2D01G034100.1	Wheat	mitochondrion	60.0	61.11
TraesCS2D01G034300.1	Wheat	plastid	66.06	60.22
GSMUA_Achr5P14420_001	Banana	cytosol	59.09	59.09
GSMUA_Achr5P14430_001	Banana	mitochondrion	53.94	58.55
Solyc08g080030.2.1	Tomato	cytosol	45.45	55.56
CDY54697	Canola	mitochondrion	24.24	54.05
PGSC0003DMT400058518	Potato	cytosol	22.73	53.96
TraesCS2D01G030900.1	Wheat	cytosol	51.21	53.48
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	51.52	53.29
Bra026966.1-P	Field mustard	cytosol	38.48	53.14
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	46.67	53.1
CDY26572	Canola	cytosol	38.48	52.7
CDY57070	Canola	cytosol	50.3	51.55
CDY17092	Canola	cytosol	16.36	50.94
PGSC0003DMT400058520	Potato	cytosol	50.0	50.77
VIT_02s0025g04730.t01	Wine grape	cytosol	48.18	50.16
Bra035498.1-P	Field mustard	cytosol	14.85	50.0
TraesCS3D01G160800.1	Wheat	cytosol	47.58	49.37
Bra019774.1-P	Field mustard	cytosol	51.52	49.28
CDX98054	Canola	cytosol	51.52	49.28
CDY16011	Canola	cytosol, peroxisome, plastid	43.94	48.99
AT2G45630.2	Thale cress	plastid	49.7	48.52
KRH48312	Soybean	cytosol	49.09	48.07
Solyc01g093990.2.1	Tomato	cytosol	46.06	47.06
KRH48313	Soybean	cytosol	46.97	46.13
KRH48311	Soybean	cytosol	46.67	46.11
CDY26571	Canola	plastid	40.91	45.61
CDY16012	Canola	cytosol, nucleus, peroxisome	33.03	45.23
KRH48310	Soybean	cytosol	43.94	43.41
KRH65202	Soybean	cytosol	28.79	42.22
KRH65201	Soybean	plastid	35.76	41.12
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	53.64	38.39
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	40.3	33.5
CDY16010	Canola	cytosol, nucleus, plastid	50.91	30.49
CDY26570	Canola	cytosol	36.36	26.67
TraesCS6D01G001700.1	Wheat	golgi, plastid	25.76	22.02
TraesCS6D01G255200.2	Wheat	mitochondrion	23.33	20.42
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	23.33	20.37
TraesCS4D01G007200.1	Wheat	golgi	23.03	20.27
TraesCS7D01G232300.1	Wheat	mitochondrion	22.73	19.89
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	20.3	18.26
TraesCS7D01G483800.1	Wheat	plastid	27.27	14.75
TraesCS1D01G222600.2	Wheat	plastid	26.67	14.22
TraesCS3D01G160900.1	Wheat	cytosol	4.24	7.53

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2D01G034600	EnsemblPlants:TraesCS2D01G034600.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr2D:-:13424732..13426551

Molecular Weight (calculated)

34944.1 Da

IEP (calculated)

7.236

GRAVY (calculated)

0.182

Length

330 amino acids

Sequence
(BLAST)

001: MAAAGGKPAV LLLRPVDAPF AAALRDRFRV LDLYAPGQAL PALAFVAAAA AVPEPPRATV IWGGVRVDAS FLDAAPSLRC VVSTAAGLDH IDLAECARRG
101: VAVANSGEVY STDVADYAVG LLLDVLRRVS ASERYVRRGS WAAQGDYPLG SKLGGKRVGI IGLGNIGSRI AKRLEAFGCI IHYNSRKPKD SVSYKYFPNV
201: HELAAESDVL VVACALNKAT RHIVNKDVLE ALGKDGVVVN IGRGANIDEA ELVIALREGK IAGAGLDVFE HEPKVPAELF SMENVVLSRH VAVLTEESRS
301: DLRAHTIGNL EAFFSGQPLL TPVHADSLAQ

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.