Factsheet for TraesCS2D01G034700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	94.91	94.91
HORVU2Hr1G005210.2	Barley	mitochondrion	75.45	90.97
TraesCS2D01G034600.1	Wheat	mitochondrion	85.63	86.67
Zm00001d024906_P001	Maize	cytosol	72.75	73.86
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	72.46	73.56
EES10400	Sorghum	cytosol	73.35	72.49
EES11738	Sorghum	cytosol	73.35	72.49
Zm00001d004451_P001	Maize	cytosol	72.75	72.11
EES10352	Sorghum	cytosol, mitochondrion	72.75	71.89
GSMUA_Achr4P17980_001	Banana	cytosol	20.36	63.55
TraesCS2D01G034100.1	Wheat	mitochondrion	61.38	63.27
TraesCS2D01G034300.1	Wheat	plastid	65.87	60.77
GSMUA_Achr5P14420_001	Banana	cytosol	59.28	60.0
GSMUA_Achr5P14430_001	Banana	mitochondrion	53.59	58.88
Solyc08g080030.2.1	Tomato	cytosol	46.41	57.41
PGSC0003DMT400058518	Potato	cytosol	23.05	55.4
CDY54697	Canola	mitochondrion	23.95	54.05
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	46.71	53.79
Bra026966.1-P	Field mustard	cytosol	38.02	53.14
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	50.6	52.98
PGSC0003DMT400058520	Potato	cytosol	51.5	52.92
CDY26572	Canola	cytosol	38.02	52.7
TraesCS2D01G030900.1	Wheat	cytosol	49.1	51.9
CDY17092	Canola	cytosol	16.47	51.89
CDY57070	Canola	cytosol	50.0	51.86
Bra035498.1-P	Field mustard	cytosol	14.97	51.02
AT2G45630.2	Thale cress	plastid	50.9	50.3
CDY16011	Canola	cytosol, peroxisome, plastid	44.31	50.0
Bra019774.1-P	Field mustard	cytosol	51.2	49.57
CDX98054	Canola	cytosol	51.2	49.57
VIT_02s0025g04730.t01	Wine grape	cytosol	46.71	49.21
TraesCS3D01G160800.1	Wheat	cytosol	46.71	49.06
KRH48312	Soybean	cytosol	48.5	48.07
Solyc01g093990.2.1	Tomato	cytosol	45.21	46.75
CDY26571	Canola	plastid	41.32	46.62
KRH48313	Soybean	cytosol	46.11	45.83
CDY16012	Canola	cytosol, nucleus, peroxisome	32.63	45.23
KRH48311	Soybean	cytosol	45.21	45.21
KRH48310	Soybean	cytosol	42.81	42.81
KRH65202	Soybean	cytosol	28.44	42.22
KRH65201	Soybean	plastid	34.43	40.07
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	54.79	39.7
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	40.12	33.75
CDY16010	Canola	cytosol, nucleus, plastid	49.7	30.13
CDY26570	Canola	cytosol	36.23	26.89
TraesCS6D01G001700.1	Wheat	golgi, plastid	24.85	21.5
TraesCS4D01G007200.1	Wheat	golgi	23.65	21.07
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	23.65	20.9
TraesCS6D01G255200.2	Wheat	mitochondrion	23.35	20.69
TraesCS7D01G232300.1	Wheat	mitochondrion	23.05	20.42
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	20.96	19.07
TraesCS7D01G483800.1	Wheat	plastid	28.74	15.74
TraesCS1D01G222600.2	Wheat	plastid	28.14	15.19
TraesCS3D01G160900.1	Wheat	cytosol	4.19	7.53

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2D01G034700	EnsemblPlants:TraesCS2D01G034700.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr2D:-:13429349..13431443

Molecular Weight (calculated)

35333.4 Da

IEP (calculated)

6.316

GRAVY (calculated)

0.178

Length

334 amino acids

Sequence
(BLAST)

001: MASAGGNPLV LPAVLHLRRS DADFTAALSE RFRVLDFFSS GEPLPAFLAA AAAAPEPPRA AVVVGGGSVR VDASFLDAVP SLRCVLTTGA GIDHIDLAEC
101: ARRGVAVANS GEVFSTDVAD YAVGLLLDVL RRVSAAERYV RRGSWPVQGD YPLGSKLGGK RVGIIGLGNI GSRIARRLEA FGCIIHYNSR KPKDSISYKY
201: FGNVHDLAAE SDVLIVACAL NKATRHIVDK DVLEALGKGG VVINIGRGAN IDEAELVVAL REGKIAGAGL DVFEHEPKVP AELFSMENVV LSRHVAVFTE
301: ESRSDLRAHT VGNLEAFFSG QPLLTPVDAD SLVQ

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.