Factsheet for TraesCS6D01G255200.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G302400.2	Wheat	mitochondrion	98.94	98.94
EES07384	Sorghum	mitochondrion	88.06	86.46
TraesCS7D01G232300.1	Wheat	mitochondrion	80.37	80.37
Os06t0486900-01	Rice	mitochondrion	79.84	79.63
VIT_14s0066g01320.t01	Wine grape	mitochondrion	80.64	79.37
KRG93315	Soybean	mitochondrion	78.25	78.67
GSMUA_Achr3P01200_001	Banana	mitochondrion	79.58	78.33
TraesCS6A01G274900.1	Wheat	mitochondrion	77.72	77.72
Solyc02g086880.2.1	Tomato	plastid	78.25	77.43
PGSC0003DMT400001303	Potato	mitochondrion	77.98	77.17
TraesCS4D01G007200.1	Wheat	golgi	76.66	77.07
CDY09885	Canola	mitochondrion	77.19	75.98
CDX69558	Canola	mitochondrion	77.19	75.78
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	73.74	75.75
Bra008737.1-P	Field mustard	mitochondrion	76.92	75.52
AT5G14780.1	Thale cress	mitochondrion	76.92	75.52
CDX85582	Canola	mitochondrion	76.66	75.46
KRG93317	Soybean	nucleus	77.72	75.32
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	77.19	75.0
Bra023487.1-P	Field mustard	mitochondrion	76.39	75.0
CDX91020	Canola	mitochondrion	75.6	74.22
TraesCS2D01G030900.1	Wheat	cytosol	20.69	24.68
TraesCS2D01G034100.1	Wheat	mitochondrion	20.69	24.07
TraesCS2D01G034300.1	Wheat	plastid	23.08	24.03
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	20.69	23.35
TraesCS2D01G034600.1	Wheat	mitochondrion	20.42	23.33
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	19.1	22.57
TraesCS3D01G160800.1	Wheat	cytosol	18.3	21.7
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	19.89	19.84
TraesCS6D01G001700.1	Wheat	golgi, plastid	19.1	18.65
TraesCS7D01G483800.1	Wheat	plastid	23.08	14.26
TraesCS1D01G222600.2	Wheat	plastid	22.28	13.57
TraesCS3D01G160900.1	Wheat	cytosol	1.86	3.76

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008863	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283
EnsemblPlantsGene:TraesCS6D01G255200	EnsemblPlants:TraesCS6D01G255200.2	TIGR:cd05302	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:+:360680802..360682473

Molecular Weight (calculated)

41215.6 Da

IEP (calculated)

7.178

GRAVY (calculated)

-0.243

Length

377 amino acids

Sequence
(BLAST)

001: MAMRNATQQV VRALEPSLTR SLHASPGSKK IVGVFYKGGE YAGQNPNFVG CVENALGIRS WLESQGHQYI VTDDKDGPNC ELEKHIADAH VLITTPFHPA
101: YVSADRIRRG KNLELLLTAG IGSDHIELPA AAAAGLTVAE VTGSNTVSVA EDQLMRILVL MRNFLPGHHQ AISGEWDLAG IAHRAYDLEG KTVGTVGAGR
201: IGKLLLQRLK PFGCNLLYHD RLRVDAALEE ELGAAFEEDL DAMLPKCDVV VLNMPLTEKT KGMFNKEKIA KMKKGVIIVN NARGAIMDTQ AVADACKSGH
301: IAGYGGDVWY PQPAPKEHPW RYMPNNAMTP HISGTTIDGQ LRYAAGVKDM LERYFKGQDF PEPNYIVKEG KLASQYQ

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.