Factsheet for TraesCS7D01G483800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G400800.1	Wheat	plastid	97.21	97.05
TraesCS7A01G496500.1	Wheat	plastid	95.74	95.42
HORVU7Hr1G111190.2	Barley	mitochondrion	81.8	94.51
EER90146	Sorghum	mitochondrion, plastid	83.44	83.03
Zm00001d046923_P001	Maize	plastid	80.16	83.02
Os06t0655100-00	Rice	plastid	81.97	78.99
TraesCS1D01G222600.2	Wheat	plastid	70.66	69.63
KRH23702	Soybean	extracellular	61.48	63.99
TraesCS2D01G034100.1	Wheat	mitochondrion	16.72	31.48
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	15.9	30.41
TraesCS2D01G030900.1	Wheat	cytosol	15.57	30.06
TraesCS3D01G160800.1	Wheat	cytosol	15.41	29.56
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	15.74	28.74
TraesCS2D01G034600.1	Wheat	mitochondrion	14.75	27.27
TraesCS2D01G034300.1	Wheat	plastid	15.74	26.52
TraesCS6D01G001700.1	Wheat	golgi, plastid	15.57	24.61
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	15.08	24.34
TraesCS6D01G255200.2	Wheat	mitochondrion	14.26	23.08
TraesCS4D01G007200.1	Wheat	golgi	14.1	22.93
TraesCS7D01G232300.1	Wheat	mitochondrion	14.1	22.81
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	12.62	20.98
TraesCS3D01G160900.1	Wheat	cytosol	1.31	4.3

Protein Annotations

KEGG:00260+1.1.1.95	KEGG:00680+1.1.1.95	Gene3D:3.30.1330.90	Gene3D:3.30.70.260	Gene3D:3.40.50.720	MapMan:4.1.4.1.1
InterPro:ASB_dom_sf	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004617	GO:GO:0005488	GO:GO:0006564	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
InterPro:IPR029009	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	InterPro:PGDH	ScanProsite:PS00065
ScanProsite:PS00670	PANTHER:PTHR42938	PANTHER:PTHR42938:SF4	SUPFAM:SSF143548	SUPFAM:SSF51735	SUPFAM:SSF52283
SUPFAM:SSF55021	TIGRFAMs:TIGR01327	EnsemblPlantsGene:TraesCS7D01G483800	EnsemblPlants:TraesCS7D01G483800.1	TIGR:cd04902	TIGR:cd12173
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:593667417..593670309

Molecular Weight (calculated)

63976.6 Da

IEP (calculated)

6.598

GRAVY (calculated)

0.203

Length

610 amino acids

Sequence
(BLAST)

001: MALATPLRHL LAAQPEPATG AAPSLQAQPA RASPHHRRLL LRSIRHVAAP SVCPASARVA ARAAGGGRPT VLVTEKLGAA GLELLRAFAN VDCAYELTAE
101: ELRAKVSLVD ALVVRSATRV TREVFEAARG RLRVVGRAGV GIDNVDLQAA TEAGCLVVNA PTANTVAAAE HAVALLAAMA RNVAQADASL KAGKWQRSKY
201: VGVSLVGKTI AIMGFGKVGS EVARRAKGLG MDVIAHDPYA PVDRARAIGV DLVSFDDAIS TADFISLHMP LTPSTTKIFN DETFAKMTKG VRLINVARGG
301: VVDEEALLRA LDNGTVAQAA LDVFFEEPPP KDSKLVHHEN VTVTPHLGAS TTEAQEGVAL EIAEAVIGAL KGELAATAVN APMVSAEVLA ELSPYVVLAE
401: KLGRLAVQLV AGGSGIKAVK IVYSSARDPD DLDTRILRGM VTKGIVEPIS SAFVNIVNAD YVAKQRGLRI IEEQILLDGS PEAPINSIQV QLANVESKFA
501: GALSDDGDIR VEGKVKDGTP HLTLVGPFSV DVSLEGNLLL CRQVDQPGII GKVGLILGTM NLNVNFMSVG RIAPGKQAIM AIGIDEEPDK EALKLIGETP
601: SVQEFVFLKL

Best Arabidopsis Sequence Match ( AT4G34200.1 )
(BLAST)

001: MSATAAASSS IAVATNSLRN VTLSSRSPLP SAISVAFPSR GRNTLQRRLV LVSCSTGDGS KPTILVAEKL GDAGIKLLED VANVDCSYNM TPEELNIKIS
101: LCDALIVRSG TKVGREVFES SHGRLKVVGR AGVGIDNVDL SAATEFGCLV VNAPTANTIA AAEHGIALMA AMARNVAQAD ASVKAGEWKR NKYVGVSLVG
201: KTLAVLGFGK VGTEVARRAK GLGMRVIAHD PYAPADRAHA IGVDLVSFDE ALATADFISL HMPLTPTTSK ILNDETFAKM KKGVRIVNVA RGGVIDEDAL
301: VRALDAGIVA QAALDVFTKE PPAKDSKLVQ HERVTVTPHL GASTMEAQEG VAIEIAEAVV GALNGELAAT AVNAPMVSAE VLTELKPYVV LAEKLGRLAV
401: QLVAGGSGVK NAKITYASAR ATDDLDTRLL RAMITKGIIE PISDVYVNLV NADFTAKQRG LRLSEERVLL DGSPESPLET ITVQLSNVES KFASSLSESG
501: EVKVEGKVKD GVPHLTKVGS FEVDVTLEGS IILCRQVDQP GMIGTVGSIL GESNVNVNFM SVGRIAPRKQ AIMAIGVDDI PSKETLKKIG EIPAVEEFVF
601: LKL

Arabidopsis Description

PGDH1D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UWV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.