Factsheet for TraesCS2D01G034300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	93.37	93.37
TraesCS2B01G048100.1	Wheat	plastid	85.91	90.41
Os04t0107200-01	Rice	mitochondrion	68.23	75.08
TraesCS2D01G034600.1	Wheat	mitochondrion	60.22	66.06
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	60.77	65.87
EES11740	Sorghum	mitochondrion	59.94	65.76
Zm00001d008883_P001	Maize	mitochondrion	56.91	62.42
TraesCS2D01G034100.1	Wheat	mitochondrion	53.59	59.88
HORVU2Hr1G005150.2	Barley	plastid	55.8	56.58
GSMUA_Achr5P14430_001	Banana	mitochondrion	46.13	54.93
Bra026966.1-P	Field mustard	cytosol	34.81	52.72
GSMUA_Achr4P17980_001	Banana	cytosol	15.47	52.34
GSMUA_Achr5P14420_001	Banana	cytosol	47.51	52.12
CDY26572	Canola	cytosol	34.53	51.87
Solyc08g080030.2.1	Tomato	cytosol	38.4	51.48
TraesCS2D01G030900.1	Wheat	cytosol	43.92	50.32
CDY57070	Canola	cytosol	43.65	49.07
PGSC0003DMT400058520	Potato	cytosol	43.92	48.92
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	43.09	48.9
CDY54697	Canola	mitochondrion	19.89	48.65
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	38.67	48.28
PGSC0003DMT400058518	Potato	cytosol	18.51	48.2
Solyc01g093990.2.1	Tomato	cytosol	42.27	47.37
KRH48312	Soybean	cytosol	43.92	47.18
TraesCS3D01G160800.1	Wheat	cytosol	40.88	46.54
AT2G45630.2	Thale cress	plastid	43.09	46.15
CDX98054	Canola	cytosol	43.92	46.09
Bra019774.1-P	Field mustard	cytosol	43.92	46.09
CDY16011	Canola	cytosol, peroxisome, plastid	37.57	45.95
CDY16012	Canola	cytosol, nucleus, peroxisome	30.11	45.23
VIT_02s0025g04730.t01	Wine grape	cytosol	38.12	43.53
CDY17092	Canola	cytosol	12.71	43.4
KRH48313	Soybean	cytosol	40.06	43.15
CDY26571	Canola	plastid	34.81	42.57
KRH48311	Soybean	cytosol	38.67	41.92
Bra035498.1-P	Field mustard	cytosol	11.33	41.84
KRH65202	Soybean	cytosol	25.69	41.33
KRH48310	Soybean	cytosol	37.85	41.02
KRH65201	Soybean	plastid	30.94	39.02
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	45.58	35.79
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	35.64	32.49
CDY16010	Canola	cytosol, nucleus, plastid	43.65	28.68
CDY26570	Canola	cytosol	31.49	25.33
TraesCS6D01G255200.2	Wheat	mitochondrion	24.03	23.08
TraesCS6D01G001700.1	Wheat	golgi, plastid	23.48	22.02
TraesCS4D01G007200.1	Wheat	golgi	22.65	21.87
TraesCS7D01G232300.1	Wheat	mitochondrion	22.65	21.75
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	22.38	21.43
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	21.27	20.98
TraesCS7D01G483800.1	Wheat	plastid	26.52	15.74
TraesCS1D01G222600.2	Wheat	plastid	25.41	14.86
TraesCS3D01G160900.1	Wheat	cytosol	3.04	5.91

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
PANTHER:PTHR10996	PANTHER:PTHR10996:SF207	SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2D01G034300	EnsemblPlants:TraesCS2D01G034300.1
TIGR:cd12156	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:13218828..13220680

Molecular Weight (calculated)

37672.4 Da

IEP (calculated)

7.249

GRAVY (calculated)

0.329

Length

362 amino acids

Sequence
(BLAST)

001: MASTVGAVAR APAAGGKPSV LYLRRANDGL AAALRARYRV HSLYDSGAPL LAFLAGAAAA RGGGEPPRAA VVVGGGAIQV DAAFLDAAPC LRCVVTTAAG
101: LDHVDLAECA RRGVAVAGAG ETFSADVADH AVGLLLDVLR RISAADRFVR RGLWPARGDC SLGSKLSGKR VGIIGLGSIG TLIARRLEAF GCTISYHSRR
201: AKDSATISYK YFPSVINLAL ESDVLIVACS LNNQTKHIVN KEVLEALGKD GVIVNIARGG NVDEAALICA LKGGGIAGAG LDVFEKEPEV PAELLSMENV
301: VLTAHEAVFT VESASDISDL MIGNLEAFFQ VYHACKSHVA EHEYHVWFAP VAAAFLKNQV CT

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.