Factsheet for Bra019774.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98054	Canola	cytosol	99.71	99.71
Bra026966.1-P	Field mustard	cytosol	55.36	79.92
AT1G12550.1	Thale cress	cytosol	70.72	75.54
Bra035498.1-P	Field mustard	cytosol	20.29	71.43
GSMUA_Achr4P17980_001	Banana	cytosol	18.26	58.88
HORVU2Hr1G005210.2	Barley	mitochondrion	44.93	55.96
PGSC0003DMT400058518	Potato	cytosol	22.32	55.4
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	51.01	55.17
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	46.09	54.83
GSMUA_Achr5P14420_001	Banana	cytosol	51.01	53.33
GSMUA_Achr5P14430_001	Banana	mitochondrion	46.96	53.29
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	48.7	53.16
Os04t0107500-01	Rice	plasma membrane	48.7	53.16
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	48.7	53.16
VIT_02s0025g04730.t01	Wine grape	cytosol	48.41	52.68
TraesCS2D01G030900.1	Wheat	cytosol	48.12	52.53
Zm00001d018790_P001	Maize	extracellular, plasma membrane	47.25	52.08
Os04t0107200-01	Rice	mitochondrion	49.57	51.98
KRH48312	Soybean	cytosol	50.72	51.93
TraesCS2A01G035400.1	Wheat	mitochondrion	49.57	51.82
OQU81061	Sorghum	plastid	47.83	51.72
PGSC0003DMT400058520	Potato	cytosol	48.7	51.69
TraesCS2D01G034600.1	Wheat	mitochondrion	49.28	51.52
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	49.86	51.5
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	49.57	51.2
Bra003537.1-P	Field mustard	cytosol	46.09	50.8
OQU88433	Sorghum	cytosol	47.25	50.78
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	48.99	50.45
HORVU4Hr1G086940.2	Barley	cytosol	18.84	50.39
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	47.83	50.15
EES11740	Sorghum	mitochondrion	47.83	50.0
KRH48311	Soybean	cytosol	47.83	49.4
Bra035206.1-P	Field mustard	cytosol	44.35	49.35
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	51.01	49.3
TraesCS7B01G456600.1	Wheat	cytosol, plastid	48.99	49.13
TraesCS7A01G538500.1	Wheat	cytosol	48.7	48.84
KRH48313	Soybean	cytosol	47.54	48.81
Zm00001d008883_P001	Maize	mitochondrion	46.67	48.79
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	48.41	48.69
TraesCS2B01G048500.1	Wheat	cytosol	47.25	48.37
Zm00001d024906_P001	Maize	cytosol	46.09	48.33
EES11738	Sorghum	cytosol	46.67	47.63
EES10352	Sorghum	cytosol, mitochondrion	46.67	47.63
TraesCS2B01G048000.1	Wheat	mitochondrion	44.64	47.53
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	44.35	47.37
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	44.35	47.37
TraesCS2A01G034900.1	Wheat	mitochondrion	44.35	47.22
OQU81058	Sorghum	cytosol	45.8	47.16
KRH48310	Soybean	cytosol	45.51	47.01
TraesCS2D01G034100.1	Wheat	mitochondrion	44.06	46.91
Zm00001d024907_P001	Maize	mitochondrion	45.8	46.88
Os04t0107300-01	Rice	mitochondrion, plasma membrane	44.06	46.63
TraesCS2B01G048100.1	Wheat	plastid	46.38	46.51
EES10400	Sorghum	cytosol	45.51	46.45
Zm00001d004451_P001	Maize	cytosol	45.22	46.29
Os11t0229100-01	Rice	extracellular	18.55	46.04
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	52.75	45.84
KRH65201	Soybean	plastid	37.97	45.64
KRH65202	Soybean	cytosol	29.28	44.89
TraesCS2D01G034300.1	Wheat	plastid	46.09	43.92
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	46.09	43.92
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	52.46	39.26
HORVU2Hr1G005150.2	Barley	plastid	33.91	32.77
Bra004275.1-P	Field mustard	cytosol	24.93	22.28
Bra004055.1-P	Field mustard	cytosol	24.64	22.02
Bra023487.1-P	Field mustard	mitochondrion	23.19	20.83
Bra003888.1-P	Field mustard	mitochondrion	22.32	20.7
Bra008737.1-P	Field mustard	mitochondrion	22.61	20.31
Bra016589.1-P	Field mustard	plastid	24.64	13.69
Bra017637.1-P	Field mustard	plastid	23.48	13.55
Bra034616.1-P	Field mustard	plastid	23.48	13.48
Bra001747.1-P	Field mustard	plastid	22.32	13.12
Bra011506.1-P	Field mustard	plastid	23.48	13.04
Bra034615.1-P	Field mustard	cytosol	0.87	1.75

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra019774	EnsemblPlants:Bra019774.1	EnsemblPlants:Bra019774.1-P	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	UniProt:M4DTD1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI000253EC81	SEG:seg	:	:	:

Description

AT1G12550 (E=1e-072) | oxidoreductase family protein

Coordinates

chrA06:-:4474742..4476014

Molecular Weight (calculated)

37510.3 Da

IEP (calculated)

6.106

GRAVY (calculated)

0.061

Length

345 amino acids

Sequence
(BLAST)

001: MEESSESPLV LVHRPPTLAY MDDHLSRNFR LLNAHLSPDP LPLFLSRHAA SVTAFVNIGR LKIDAELLSH LPSLQLLVCT SVGTDHVDLA ECKRRGIAVT
101: NAGDAFSDDV ADCAVGLLLS VLRRIPAGDR YVRSGNWSKP GQFQLGIKTK RYIVVGYRES VDKDENYLMN LVSGKRVGII GLGSIGSRIA KRLEPFGCII
201: SYNSRTQKQS IPYRYYSDVL SLAADNDVLV LCCSLTDQTR HVVNREVMES LGKEGVIINV GRGGLIDEEE MVKCLVEGVI GGAGLDVFEK EPQVPEELFG
301: MDNVVLSPHA AVATPGALES VAEVAIANLK AFFSNQPLVS PVRLG

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.