Factsheet for TraesCS2B01G048000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G034100.1	Wheat	mitochondrion	94.14	94.14
TraesCS2A01G034900.1	Wheat	mitochondrion	93.21	93.21
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	76.54	76.78
Os04t0107300-01	Rice	mitochondrion, plasma membrane	70.99	70.55
Os11t0229100-01	Rice	extracellular	27.47	64.03
TraesCS7B01G456600.1	Wheat	cytosol, plastid	66.98	63.08
TraesCS2B01G048500.1	Wheat	cytosol	62.04	59.64
TraesCS2B01G048100.1	Wheat	plastid	62.96	59.3
GSMUA_Achr4P17980_001	Banana	cytosol	18.52	56.07
GSMUA_Achr5P14420_001	Banana	cytosol	57.1	56.06
GSMUA_Achr5P14430_001	Banana	mitochondrion	52.47	55.92
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	53.4	54.75
Solyc08g080030.2.1	Tomato	cytosol	43.21	51.85
PGSC0003DMT400058518	Potato	cytosol	21.91	51.08
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	44.75	50.0
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	48.15	49.37
TraesCS4B01G324200.1	Wheat	peroxisome	47.84	49.05
AT2G45630.2	Thale cress	plastid	50.0	47.93
CDY57070	Canola	cytosol	47.53	47.83
CDY26572	Canola	cytosol	35.49	47.72
Bra026966.1-P	Field mustard	cytosol	35.19	47.7
PGSC0003DMT400058520	Potato	cytosol	47.53	47.38
VIT_02s0025g04730.t01	Wine grape	cytosol	46.3	47.32
CDY54697	Canola	mitochondrion	21.3	46.62
KRH48312	Soybean	cytosol	48.46	46.59
Bra035498.1-P	Field mustard	cytosol	13.89	45.92
Solyc01g093990.2.1	Tomato	cytosol	45.37	45.51
CDY17092	Canola	cytosol	14.81	45.28
KRH48313	Soybean	cytosol	46.6	44.94
Bra019774.1-P	Field mustard	cytosol	47.53	44.64
CDX98054	Canola	cytosol	47.53	44.64
CDY16011	Canola	cytosol, peroxisome, plastid	40.74	44.59
CDY16012	Canola	cytosol, nucleus, peroxisome	31.17	41.91
KRH48311	Soybean	cytosol	42.9	41.62
KRH65202	Soybean	cytosol	28.7	41.33
CDY26571	Canola	plastid	37.65	41.22
KRH48310	Soybean	cytosol	40.74	39.52
KRH65201	Soybean	plastid	33.95	38.33
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	51.54	36.23
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	39.51	32.24
CDY16010	Canola	cytosol, nucleus, plastid	47.53	27.95
TraesCS5B01G226200.1	Wheat	cytosol	10.8	25.93
CDY26570	Canola	cytosol	35.19	25.33
TraesCS6B01G004400.1	Wheat	peroxisome	27.47	23.06
TraesCS7B01G373500.1	Wheat	cytosol	7.1	22.12
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	24.07	20.63
TraesCS7B01G130600.1	Wheat	mitochondrion	23.15	19.89
TraesCS6B01G302400.2	Wheat	mitochondrion	23.15	19.89
TraesCS4B01G066400.1	Wheat	mitochondrion	20.99	19.15
TraesCS7B01G400800.1	Wheat	plastid	31.17	16.53
TraesCS1B01G234300.2	Wheat	plastid	30.25	15.83

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF158
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2B01G048000	EnsemblPlants:TraesCS2B01G048000.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr2B:-:23736105..23737079

Molecular Weight (calculated)

34053.1 Da

IEP (calculated)

6.705

GRAVY (calculated)

0.346

Length

324 amino acids

Sequence
(BLAST)

001: MAATRRVLVL CRLSPSSLAG LAARFSLLDR HASPLSMEAF LAAAAAANDP PRLALVPGVG VRVDAAFLDA VPSLRCVVTV SAGLNHVDLP ECARRGVAVA
101: NAAGVYSSDV TDHAVGLVID VLRRVSAADR YVRRGLWPER GDFLPLGSRL RGKRVGIVGL GSIGSAVARR LEAFGCVVSY QSRGRKHDVS YCYHPTVHDL
201: AACSDVLVVA CALTAETRHV VDRRVLDALG SGGVVVNVAR GPNVDEAELV RALAEGRLAG AGLDVFEDEP DVPAELMAMD NVVLTPHRAA FTPESIADLD
301: RLVVGNLDAF FAGTPLLTPV VVCD

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.