Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G496700.1 | Wheat | cytosol, peroxisome, plastid | 93.99 | 93.99 |
| TraesCS3B01G180100.1 | Wheat | cytosol, golgi, unclear | 91.77 | 91.77 |
| KXG31500 | Sorghum | cytosol | 82.59 | 82.86 |
| Os01t0228600-01 | Rice | extracellular | 79.11 | 79.11 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 75.63 | 74.69 |
| GSMUA_Achr3P03420_001 | Banana | cytosol | 73.73 | 73.73 |
| Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 70.57 | 71.25 |
| KRH47286 | Soybean | nucleus | 68.04 | 68.69 |
| VIT_09s0002g04300.t01 | Wine grape | cytosol | 67.72 | 68.37 |
| GSMUA_Achr3P31530_001 | Banana | cytosol | 67.41 | 67.41 |
| PGSC0003DMT400019584 | Potato | cytosol | 66.46 | 67.09 |
| AT1G79870.1 | Thale cress | cytosol | 66.14 | 66.77 |
| CDX79406 | Canola | cytosol | 66.14 | 66.77 |
| Solyc12g044260.1.1 | Tomato | cytosol | 66.14 | 66.77 |
| Bra003537.1-P | Field mustard | cytosol | 65.51 | 66.13 |
| CDX67931 | Canola | cytosol | 65.51 | 66.13 |
| KRH44352 | Soybean | peroxisome | 31.96 | 66.01 |
| Bra035206.1-P | Field mustard | cytosol | 64.56 | 65.81 |
| CDX87280 | Canola | cytosol | 64.56 | 65.81 |
| Solyc12g044250.1.1 | Tomato | vacuole | 65.19 | 65.4 |
| CDY58781 | Canola | cytosol | 63.92 | 64.54 |
| PGSC0003DMT400019586 | Potato | extracellular | 63.29 | 63.49 |
| VIT_09s0002g04290.t01 | Wine grape | cytosol, plastid | 59.81 | 60.38 |
| Solyc03g120680.2.1 | Tomato | nucleus | 59.18 | 60.13 |
| KRH09880 | Soybean | cytosol | 56.33 | 58.75 |
| TraesCS2B01G047900.1 | Wheat | cytosol, peroxisome, plastid | 49.68 | 49.68 |
| TraesCS2B01G048000.1 | Wheat | mitochondrion | 49.05 | 47.84 |
| TraesCS1B01G004500.1 | Wheat | extracellular, golgi, mitochondrion | 46.84 | 45.82 |
| TraesCS2B01G048500.1 | Wheat | cytosol | 48.42 | 45.4 |
| TraesCS2B01G048100.1 | Wheat | plastid | 48.73 | 44.77 |
| TraesCS7B01G456600.1 | Wheat | cytosol, plastid | 47.78 | 43.9 |
| TraesCS5B01G226200.1 | Wheat | cytosol | 12.97 | 30.37 |
| TraesCS6B01G004400.1 | Wheat | peroxisome | 30.7 | 25.13 |
| TraesCS7B01G373500.1 | Wheat | cytosol | 6.65 | 20.19 |
| TraesCS5B01G158700.2 | Wheat | mitochondrion, plastid | 22.47 | 18.78 |
| TraesCS7B01G130600.1 | Wheat | mitochondrion | 21.52 | 18.04 |
| TraesCS6B01G302400.2 | Wheat | mitochondrion | 21.2 | 17.77 |
| TraesCS4B01G066400.1 | Wheat | mitochondrion | 19.94 | 17.75 |
| TraesCS7B01G400800.1 | Wheat | plastid | 29.43 | 15.22 |
| TraesCS1B01G234300.2 | Wheat | plastid | 28.48 | 14.54 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0051287 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00389 | PFAM:PF02826 | PANTHER:PTHR10996 | PANTHER:PTHR10996:SF139 |
| SUPFAM:SSF51735 | SUPFAM:SSF52283 | EnsemblPlantsGene:TraesCS4B01G324200 | EnsemblPlants:TraesCS4B01G324200.1 | TIGR:cd12156 | SEG:seg |
Description
No Description!
Coordinates
chr4B:+:615192158..615195319
Molecular Weight (calculated)
34514.9 Da
IEP (calculated)
6.316
GRAVY (calculated)
0.131
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLSVLLLH PVNAYLEQEL DRRFRLIRLW DSPPDGRAEF LRANASAIRA VVAYPGYSAL AALIDALPSL EIVASFSVGI DHVDLPKCRE RGIRVTNTPD
101: VLTDDVADLA VGLAIAALRR IPQADRFVRA GLWKAKGDYA LTTRFSGKRV GIIGLGRIGL AIATRVEAFH CPVNYYQRTK KDYPNYTYYP SVVELAANSD
201: ILVVACLLSE LTRHIVNREV MEALGPKGVL INIGRGPHVD EPELVSALVE GRLGGAGLDV FEDEPDVPES LFTLDNVVLV PHMGSGTHET RKAMADLVLG
301: NLEAHVLKKP LLTPVI
101: VLTDDVADLA VGLAIAALRR IPQADRFVRA GLWKAKGDYA LTTRFSGKRV GIIGLGRIGL AIATRVEAFH CPVNYYQRTK KDYPNYTYYP SVVELAANSD
201: ILVVACLLSE LTRHIVNREV MEALGPKGVL INIGRGPHVD EPELVSALVE GRLGGAGLDV FEDEPDVPES LFTLDNVVLV PHMGSGTHET RKAMADLVLG
301: NLEAHVLKKP LLTPVI
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Arabidopsis Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.