Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G324200.1 | Wheat | peroxisome | 93.99 | 93.99 |
| TraesCS3A01G153500.1 | Wheat | peroxisome | 90.51 | 89.94 |
| KXG31500 | Sorghum | cytosol | 80.7 | 80.95 |
| Os01t0228600-01 | Rice | extracellular | 78.48 | 78.48 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 75.0 | 74.06 |
| GSMUA_Achr3P03420_001 | Banana | cytosol | 71.52 | 71.52 |
| Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 68.35 | 69.01 |
| KRH47286 | Soybean | nucleus | 66.46 | 67.09 |
| VIT_09s0002g04300.t01 | Wine grape | cytosol | 66.14 | 66.77 |
| GSMUA_Achr3P31530_001 | Banana | cytosol | 65.82 | 65.82 |
| PGSC0003DMT400019584 | Potato | cytosol | 65.19 | 65.81 |
| Solyc12g044250.1.1 | Tomato | vacuole | 65.51 | 65.71 |
| Solyc12g044260.1.1 | Tomato | cytosol | 64.56 | 65.18 |
| AT1G79870.1 | Thale cress | cytosol | 64.56 | 65.18 |
| CDX79406 | Canola | cytosol | 64.24 | 64.86 |
| KRH44352 | Soybean | peroxisome | 31.33 | 64.71 |
| PGSC0003DMT400019586 | Potato | extracellular | 64.24 | 64.44 |
| Bra003537.1-P | Field mustard | cytosol | 63.61 | 64.22 |
| CDX67931 | Canola | cytosol | 63.61 | 64.22 |
| Bra035206.1-P | Field mustard | cytosol | 62.97 | 64.19 |
| CDX87280 | Canola | cytosol | 62.97 | 64.19 |
| CDY58781 | Canola | cytosol | 62.34 | 62.94 |
| Solyc03g120680.2.1 | Tomato | nucleus | 58.54 | 59.49 |
| VIT_09s0002g04290.t01 | Wine grape | cytosol, plastid | 58.86 | 59.42 |
| KRH09880 | Soybean | cytosol | 56.33 | 58.75 |
| TraesCS2A01G035400.1 | Wheat | mitochondrion | 50.63 | 48.48 |
| TraesCS2A01G034800.1 | Wheat | cytosol, plasma membrane, plastid | 48.1 | 48.1 |
| TraesCS2A01G034900.1 | Wheat | mitochondrion | 48.1 | 46.91 |
| TraesCS2A01G035500.1 | Wheat | extracellular, mitochondrion | 49.05 | 46.41 |
| TraesCS7A01G538500.1 | Wheat | cytosol | 47.47 | 43.6 |
| TraesCS2A01G028600.1 | Wheat | extracellular, plasma membrane | 45.89 | 43.28 |
| TraesCS2A01G035000.2 | Wheat | mitochondrion, plastid | 47.47 | 41.44 |
| TraesCS6A01G000400.1 | Wheat | peroxisome | 30.7 | 25.13 |
| TraesCS7A01G232200.1 | Wheat | golgi | 22.47 | 18.83 |
| TraesCS5A01G161300.1 | Wheat | plastid | 21.52 | 17.99 |
| TraesCS7A01G496500.1 | Wheat | plastid | 28.48 | 14.71 |
| TraesCS6A01G274900.1 | Wheat | mitochondrion | 17.09 | 14.32 |
| TraesCS3A01G146800.1 | Wheat | plastid | 26.9 | 13.71 |
| TraesCS2A01G508900.1 | Wheat | plastid | 26.27 | 13.47 |
| TraesCS1A01G221000.1 | Wheat | plastid | 22.47 | 12.18 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0051287 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00389 | PFAM:PF02826 | PANTHER:PTHR10996 | PANTHER:PTHR10996:SF139 |
| SUPFAM:SSF51735 | SUPFAM:SSF52283 | EnsemblPlantsGene:TraesCS5A01G496700 | EnsemblPlants:TraesCS5A01G496700.1 | TIGR:cd12156 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:663946457..663948368
Molecular Weight (calculated)
34338.6 Da
IEP (calculated)
5.921
GRAVY (calculated)
0.139
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: METLGVLLLH PVNAYLEQEL DRRFRLIRLW DAPPDGSAEF LRANASAIRA VVAYPGYSAL AALIDALPSL EIVLSFSVGI DHVDLPKCRE RGIRVTNTPD
101: VLTDDVADLA VGLAVAALRR IPQADRFVRA GLWKAKGDYA LTTRFSGKRV GIIGLGRIGL AIATRVEAFD CPVNYYQRTK KDYPSYTYYP SVVGLAASSD
201: VLVVACSLNE QTRHIVNREV IEALGPKGVL INIGRGPHVD EPELVSALIE GRLGGAGLDV FEDEPNVPES LFTLDNVVLV SHMGSGTHET RKAMADLVLD
301: NLEAHVLKKP LLTPVI
101: VLTDDVADLA VGLAVAALRR IPQADRFVRA GLWKAKGDYA LTTRFSGKRV GIIGLGRIGL AIATRVEAFD CPVNYYQRTK KDYPSYTYYP SVVGLAASSD
201: VLVVACSLNE QTRHIVNREV IEALGPKGVL INIGRGPHVD EPELVSALIE GRLGGAGLDV FEDEPNVPES LFTLDNVVLV SHMGSGTHET RKAMADLVLD
301: NLEAHVLKKP LLTPVI
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Arabidopsis Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.