Factsheet for PGSC0003DMT400019584

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g044260.1.1	Tomato	cytosol	96.49	96.49
CDX79406	Canola	cytosol	74.44	74.44
VIT_09s0002g04300.t01	Wine grape	cytosol	74.44	74.44
Bra003537.1-P	Field mustard	cytosol	73.8	73.8
CDX67931	Canola	cytosol	73.8	73.8
AT1G79870.1	Thale cress	cytosol	73.16	73.16
Bra035206.1-P	Field mustard	cytosol	72.2	72.9
CDX87280	Canola	cytosol	72.2	72.9
CDY58781	Canola	cytosol	72.2	72.2
KRH47286	Soybean	nucleus	72.2	72.2
KRH44352	Soybean	peroxisome	35.14	71.9
PGSC0003DMT400019586	Potato	extracellular	71.57	71.11
GSMUA_Achr3P03420_001	Banana	cytosol	70.29	69.62
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	69.65	68.99
TraesCS3A01G153500.1	Wheat	peroxisome	69.65	68.55
KXG31500	Sorghum	cytosol	68.37	67.94
TraesCS4B01G324200.1	Wheat	peroxisome	67.09	66.46
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	65.81	65.19
Os01t0228600-01	Rice	extracellular	64.22	63.61
GSMUA_Achr3P31530_001	Banana	cytosol	63.9	63.29
Zm00001d030544_P001	Maize	cytosol, extracellular	60.7	59.38
PGSC0003DMT400058518	Potato	cytosol	21.09	47.48
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	69.97	45.06
PGSC0003DMT400058520	Potato	cytosol	42.81	41.23
PGSC0003DMT400085920	Potato	mitochondrion	15.34	26.09
PGSC0003DMT400071027	Potato	cytosol	24.92	25.32
PGSC0003DMT400015828	Potato	cytosol	29.07	23.58
PGSC0003DMT400001303	Potato	mitochondrion	20.45	16.8
PGSC0003DMT400046698	Potato	plastid	26.84	14.0
PGSC0003DMT400059818	Potato	plastid	25.24	13.28
PGSC0003DMT400023675	Potato	plastid	26.84	13.17
TraesCS3D01G160900.1	Wheat	cytosol	7.03	11.83
PGSC0003DMT400068907	Potato	cytosol	5.11	10.6

Protein Annotations

EntrezGene:102591611	Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	UniProt:M1AC98	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF02826	EnsemblPlantsGene:PGSC0003DMG400007572	PGSC:PGSC0003DMG400007572	EnsemblPlants:PGSC0003DMT400019584	PANTHER:PTHR10996	PANTHER:PTHR10996:SF139
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000294C215	RefSeq:XP_006359456.1	SEG:seg	:

Description

Hydroxyphenylpyruvate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400007572]

Coordinates

chr12:-:50613003..50614632

Molecular Weight (calculated)

34424.6 Da

IEP (calculated)

4.987

GRAVY (calculated)

0.026

Length

313 amino acids

Sequence
(BLAST)

001: MESIGVLMAC PMSSYLEQQL DNRFNLIRYW NFSDKKQFIN NYAHSIRAVV GNAAAGADAE LIEALPQLEI VTSFSVGLDK IDLNKCKEKG IRVTNTPDVL
101: TEDVADLAIG LMLAVLRRIC ESDRYVKKGL WKAGDFELTS KFSGKRVGII GLGRIGLAIA KRAEAFDCPI SYYARSEKAN TNYNYYPTVV ELATNCEILV
201: VACALTPETR YIVNREVIYA LGPKGILINI GRGPHVDEKE MVSALLDGRL GGAGLDVFEN EPEVPDKLFG LENVVLLPHV ASGTEETRES MADIVIGNLE
301: AHFQNKPLLT PVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.