Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67931 | Canola | cytosol | 97.12 | 97.12 |
| AT1G79870.1 | Thale cress | cytosol | 87.54 | 87.54 |
| CDX87280 | Canola | cytosol | 85.62 | 86.45 |
| CDY58781 | Canola | cytosol | 85.62 | 85.62 |
| Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 79.55 | 79.55 |
| VIT_09s0002g04300.t01 | Wine grape | cytosol | 75.4 | 75.4 |
| KRH47286 | Soybean | nucleus | 75.08 | 75.08 |
| Solyc12g044260.1.1 | Tomato | cytosol | 75.08 | 75.08 |
| PGSC0003DMT400019584 | Potato | cytosol | 74.44 | 74.44 |
| KRH44352 | Soybean | peroxisome | 36.1 | 73.86 |
| Solyc12g044250.1.1 | Tomato | vacuole | 72.52 | 72.06 |
| GSMUA_Achr3P03420_001 | Banana | cytosol | 71.25 | 70.57 |
| PGSC0003DMT400019586 | Potato | extracellular | 70.29 | 69.84 |
| TraesCS3A01G153500.1 | Wheat | peroxisome | 69.33 | 68.24 |
| TraesCS3B01G180100.1 | Wheat | cytosol, golgi, unclear | 68.69 | 68.04 |
| TraesCS3D01G160800.1 | Wheat | cytosol | 69.01 | 67.92 |
| Os01t0228600-01 | Rice | extracellular | 68.37 | 67.72 |
| KXG31500 | Sorghum | cytosol | 67.73 | 67.3 |
| TraesCS4B01G324200.1 | Wheat | peroxisome | 66.77 | 66.14 |
| VIT_09s0002g04290.t01 | Wine grape | cytosol, plastid | 65.18 | 65.18 |
| TraesCS5A01G496700.1 | Wheat | cytosol, peroxisome, plastid | 64.86 | 64.24 |
| Solyc03g120680.2.1 | Tomato | nucleus | 62.62 | 63.02 |
| KRH09880 | Soybean | cytosol | 60.38 | 62.38 |
| GSMUA_Achr3P31530_001 | Banana | cytosol | 62.3 | 61.71 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 60.38 | 59.06 |
| CDY17092 | Canola | cytosol | 17.89 | 52.83 |
| CDY54697 | Canola | mitochondrion | 24.6 | 52.03 |
| CDY26572 | Canola | cytosol | 38.34 | 49.79 |
| CDY16011 | Canola | cytosol, peroxisome, plastid | 45.37 | 47.97 |
| CDY57070 | Canola | cytosol | 48.24 | 46.89 |
| CDX98054 | Canola | cytosol | 50.16 | 45.51 |
| HORVU3Hr1G031200.3 | Barley | cytosol, mitochondrion | 69.01 | 44.44 |
| CDY26571 | Canola | plastid | 39.94 | 42.23 |
| CDY16012 | Canola | cytosol, nucleus, peroxisome | 30.99 | 40.25 |
| CDY16010 | Canola | cytosol, nucleus, plastid | 50.8 | 28.86 |
| CDY26570 | Canola | cytosol | 36.1 | 25.11 |
| CDY07405 | Canola | cytosol | 29.71 | 24.09 |
| CDY04198 | Canola | cytosol | 29.71 | 23.6 |
| CDY50445 | Canola | mitochondrion | 26.52 | 22.25 |
| CDX68275 | Canola | mitochondrion | 25.88 | 21.77 |
| CDX96054 | Canola | mitochondrion | 29.71 | 20.31 |
| CDY09885 | Canola | mitochondrion | 24.6 | 20.1 |
| CDX69558 | Canola | mitochondrion | 24.6 | 20.05 |
| CDX85582 | Canola | mitochondrion | 23.96 | 19.58 |
| CDX91020 | Canola | mitochondrion | 23.32 | 19.01 |
| CDY57736 | Canola | plastid | 20.77 | 17.06 |
| CDY01876 | Canola | endoplasmic reticulum, plasma membrane | 29.71 | 13.42 |
| CDX96754 | Canola | plastid | 25.56 | 12.88 |
| CDX83893 | Canola | plastid | 25.56 | 12.86 |
| CDY49286 | Canola | plastid | 24.28 | 12.71 |
| CDX72462 | Canola | plastid | 24.28 | 12.71 |
| CDX75409 | Canola | plastid | 23.96 | 12.58 |
| CDX76268 | Canola | plastid | 23.96 | 12.5 |
| TraesCS3D01G160900.1 | Wheat | cytosol | 7.35 | 12.37 |
| CDY22972 | Canola | plastid | 23.0 | 12.27 |
| CDX82295 | Canola | plastid | 23.0 | 12.27 |
| CDX69034 | Canola | plastid | 23.96 | 11.87 |
| CDY12275 | Canola | cytosol | 12.46 | 11.4 |
| CDY57737 | Canola | cytosol | 1.6 | 2.92 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | GO:A0A078CQC5 | EnsemblPlants:CDX79406 | ProteinID:CDX79406 | ProteinID:CDX79406.1 |
| InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_CS1 | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0051287 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00132122001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00389 | PFAM:PF02826 | ScanProsite:PS00065 | PANTHER:PTHR10996 |
| PANTHER:PTHR10996:SF139 | SUPFAM:SSF51735 | SUPFAM:SSF52283 | UniParc:UPI0004EAD6A9 | SEG:seg | : |
Description
BnaC06g18970D
Coordinates
chrLK031817:-:1974888..1976595
Molecular Weight (calculated)
34373.8 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.014
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MESIGVLMMC PMNSYLENEL QKRYNLHRFW TCPEKSVFLE THRNSIRAIV GNASAGADAK LIDDLPKLEI ISSFSVGLDK IDLGKCKEKG IRVTNTPEVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKYGDFKLTT KFSGKSVGII GLGRIGAAIA KRAQGFNCPI NYYSRTEKPD VGYKYYPTVV ELAQNSDILV
201: VACALTDETR HIVNREVMDA LGAKGVLINI GRGPHVDEKE MVKALTEGRL GGAGLDVFEQ EPHVPEELFG LENVVLVPHV ASATVETRTA MADLVLGNLE
301: AHFAGKPLLT QVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKYGDFKLTT KFSGKSVGII GLGRIGAAIA KRAQGFNCPI NYYSRTEKPD VGYKYYPTVV ELAQNSDILV
201: VACALTDETR HIVNREVMDA LGAKGVLINI GRGPHVDEKE MVKALTEGRL GGAGLDVFEQ EPHVPEELFG LENVVLVPHV ASATVETRTA MADLVLGNLE
301: AHFAGKPLLT QVV
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Arabidopsis Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.