CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003888.1-P	Field mustard	mitochondrion	97.85	97.85
CDY50445	Canola	mitochondrion	97.31	97.05
AT1G72190.1	Thale cress	mitochondrion	84.41	84.18
Solyc11g020060.1.1	Tomato	cytosol	49.46	65.48
VIT_18s0041g01830.t01	Wine grape	cytosol	60.22	65.31
PGSC0003DMT400071027	Potato	cytosol	51.88	62.66
PGSC0003DMT400085920	Potato	mitochondrion	30.11	60.87
GSMUA_Achr3P21910_001	Banana	cytosol	55.38	60.41
KRH62463	Soybean	mitochondrion	61.83	58.82
EER96197	Sorghum	mitochondrion	56.45	54.55
KXG34859	Sorghum	mitochondrion, plastid	55.91	54.17
Os07t0264100-01	Rice	mitochondrion	53.76	53.48
Solyc03g044670.1.1	Tomato	cytosol	34.14	52.92
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	53.49	52.65
Os07t0263400-00	Rice	cytosol	40.05	52.46
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	53.23	52.38
TraesCS5A01G161300.1	Wheat	plastid	53.23	52.38
Zm00001d005489_P006	Maize	mitochondrion	54.57	51.92
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	53.49	50.0
TraesCS7B01G373500.1	Wheat	cytosol	12.37	44.23
CDX67931	Canola	cytosol	21.77	25.88
CDX79406	Canola	cytosol	21.77	25.88
CDY54697	Canola	mitochondrion	10.22	25.68
CDX87280	Canola	cytosol	20.97	25.16
CDY58781	Canola	cytosol	20.97	24.92
CDY57070	Canola	cytosol	20.97	24.22
CDY26572	Canola	cytosol	15.32	23.65
CDX98054	Canola	cytosol	21.51	23.19
CDY17092	Canola	cytosol	6.45	22.64
CDY16012	Canola	cytosol, nucleus, peroxisome	14.52	22.41
CDY09885	Canola	mitochondrion	22.85	22.19
CDX69558	Canola	mitochondrion	22.85	22.14
CDY16011	Canola	cytosol, peroxisome, plastid	17.47	21.96
CDX85582	Canola	mitochondrion	22.31	21.67
CDX91020	Canola	mitochondrion	21.77	21.09
CDY57736	Canola	plastid	21.51	21.0
CDY26571	Canola	plastid	16.4	20.61
CDY07405	Canola	cytosol	20.16	19.43
CDY04198	Canola	cytosol	20.16	19.04
CDX96054	Canola	mitochondrion	20.16	16.38
CDX72462	Canola	plastid	25.54	15.89
CDY49286	Canola	plastid	25.54	15.89
CDX75409	Canola	plastid	25.0	15.6
CDX76268	Canola	plastid	25.0	15.5
CDX82295	Canola	plastid	23.66	14.99
CDY22972	Canola	plastid	23.66	14.99
CDX69034	Canola	plastid	25.0	14.72
CDX96754	Canola	plastid	23.92	14.33
CDX83893	Canola	plastid	23.92	14.31
CDY16010	Canola	cytosol, nucleus, plastid	20.97	14.16
CDY26570	Canola	cytosol	14.52	12.0
CDY12275	Canola	cytosol	10.75	11.7
CDY01876	Canola	endoplasmic reticulum, plasma membrane	20.43	10.97
CDY57737	Canola	cytosol	1.08	2.34

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:A0A078BU96	EnsemblPlants:CDX68275	ProteinID:CDX68275	ProteinID:CDX68275.1
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00099556001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938
PANTHER:PTHR42938:SF2	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EE1FDB	SEG:seg	:

Description

BnaA07g23150D

Coordinates

chrLK031787:+:4751228..4753124

Molecular Weight (calculated)

40921.7 Da

IEP (calculated)

9.040

GRAVY (calculated)

-0.060

Length

372 amino acids

Sequence
(BLAST)

001: MYNIAKAAFR NKNSTVASLL CSHQSRSISR QSSKLVKPER MAEKEEDKKV TRVLFCGPHL PDSYNFTRDY LQPYPFIQAD VAHFRDVPEV IKNYHICVTL
101: LMQMDSFVIS RATNMKLIMQ FGVGLDGVDI DAATKHGIKV ARIPSEGNGN AASCSEMAIY LMLGLLKKQN EMQMSVQSRL LGQPTGGTLL GKTVFILGYG
201: NIGIELAKRL KPFGSRVIAT KRSWPASVMN SDSSLVDEKG SHEDIYTFAS KADIVVVCLR LSKETAEIVN NKFISSMKKG ALLVNIARGG LINYESAYQS
301: LESGYLGGLG TDVAWSEPFD PNDPILKFKN VIMTPHVAGV TEFSYRSMAK VVGDVALQLH EGLPLTGIEL VN

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.