CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035206.1-P	Field mustard	cytosol	99.68	99.68
CDY58781	Canola	cytosol	94.52	93.61
AT1G79870.1	Thale cress	cytosol	88.06	87.22
CDX67931	Canola	cytosol	86.45	85.62
CDX79406	Canola	cytosol	86.45	85.62
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	78.06	77.32
VIT_09s0002g04300.t01	Wine grape	cytosol	73.55	72.84
Solyc12g044260.1.1	Tomato	cytosol	73.55	72.84
PGSC0003DMT400019584	Potato	cytosol	72.9	72.2
KRH47286	Soybean	nucleus	72.26	71.57
Solyc12g044250.1.1	Tomato	vacuole	71.94	70.79
KRH44352	Soybean	peroxisome	34.52	69.93
PGSC0003DMT400019586	Potato	extracellular	70.32	69.21
GSMUA_Achr3P03420_001	Banana	cytosol	68.71	67.41
TraesCS3A01G153500.1	Wheat	peroxisome	68.71	66.98
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	68.06	66.77
TraesCS3D01G160800.1	Wheat	cytosol	68.39	66.67
KXG31500	Sorghum	cytosol	66.77	65.71
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	65.48	64.86
TraesCS4B01G324200.1	Wheat	peroxisome	65.81	64.56
Os01t0228600-01	Rice	extracellular	65.16	63.92
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	64.19	62.97
KRH09880	Soybean	cytosol	61.29	62.71
Solyc03g120680.2.1	Tomato	nucleus	61.94	61.74
GSMUA_Achr3P31530_001	Banana	cytosol	61.94	60.76
Zm00001d030544_P001	Maize	cytosol, extracellular	59.35	57.5
CDY54697	Canola	mitochondrion	23.23	48.65
CDY17092	Canola	cytosol	16.45	48.11
CDY26572	Canola	cytosol	36.77	47.3
CDY16011	Canola	cytosol, peroxisome, plastid	43.55	45.61
CDY57070	Canola	cytosol	47.1	45.34
CDX98054	Canola	cytosol	49.35	44.35
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	68.39	43.62
CDY26571	Canola	plastid	39.03	40.88
CDY16012	Canola	cytosol, nucleus, peroxisome	30.65	39.42
CDY16010	Canola	cytosol, nucleus, plastid	49.03	27.59
CDY26570	Canola	cytosol	34.19	23.56
CDY07405	Canola	cytosol	28.06	22.54
CDY04198	Canola	cytosol	28.06	22.08
CDY50445	Canola	mitochondrion	25.81	21.45
CDX68275	Canola	mitochondrion	25.16	20.97
CDY09885	Canola	mitochondrion	23.87	19.32
CDX69558	Canola	mitochondrion	23.87	19.27
CDX96054	Canola	mitochondrion	28.39	19.21
CDY57736	Canola	plastid	23.23	18.9
CDX85582	Canola	mitochondrion	23.23	18.8
CDX91020	Canola	mitochondrion	22.9	18.49
CDY49286	Canola	plastid	26.45	13.71
CDX72462	Canola	plastid	26.45	13.71
CDX96754	Canola	plastid	27.42	13.69
CDX83893	Canola	plastid	27.42	13.67
CDX75409	Canola	plastid	25.81	13.42
CDX76268	Canola	plastid	25.81	13.33
CDY22972	Canola	plastid	24.52	12.95
CDX82295	Canola	plastid	24.52	12.95
CDY01876	Canola	endoplasmic reticulum, plasma membrane	28.39	12.7
CDX69034	Canola	plastid	25.81	12.66
CDY12275	Canola	cytosol	13.23	11.99
TraesCS3D01G160900.1	Wheat	cytosol	7.1	11.83
CDY57737	Canola	cytosol	1.61	2.92

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078DDI0	EnsemblPlants:CDX87280	ProteinID:CDX87280	ProteinID:CDX87280.1
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00146238001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996
PANTHER:PTHR10996:SF139	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EF3222	SEG:seg	:

Description

BnaA07g35930D

Coordinates

chrLK031850:+:4017..5117

Molecular Weight (calculated)

34053.3 Da

IEP (calculated)

5.428

GRAVY (calculated)

0.073

Length

310 amino acids

Sequence
(BLAST)

001: MESIGVLMMC PMSSYLENEL QKRFNLVRFW NFPVFLETHR NSIRAVVGNA STGADAELID GLPKLEIISS FSVGIDKIDL GKCKEKGIRV TNTPDVLTED
101: VADLAIGLIL ALLRRLCECD RYVRSRKWEY GDFQLATKFS GKSVGILGLG RIGTAIAKRA EAFSCPVSYY SRRVKPDLGY KYYPTVVELA QNSDILVVAC
201: PLTDETRHIV NRHVMDALGA KGVLINIGRG PHVDEQELVN ALTEGRLGGA ALDVFEQEPH VPEELFPLEN VVLLPHVGSS TVETENAMAD LVVANLEAHF
301: AGKSLLTPVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.