Factsheet for VIT_09s0002g04300.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	81.15	81.15
KRH47286	Soybean	nucleus	77.96	77.96
CDX79406	Canola	cytosol	75.4	75.4
AT1G79870.1	Thale cress	cytosol	74.76	74.76
CDX67931	Canola	cytosol	74.44	74.44
PGSC0003DMT400019584	Potato	cytosol	74.44	74.44
Bra003537.1-P	Field mustard	cytosol	74.12	74.12
Solyc12g044260.1.1	Tomato	cytosol	74.12	74.12
CDX87280	Canola	cytosol	72.84	73.55
Bra035206.1-P	Field mustard	cytosol	72.84	73.55
KRH44352	Soybean	peroxisome	35.78	73.2
CDY58781	Canola	cytosol	72.52	72.52
GSMUA_Achr3P03420_001	Banana	cytosol	72.2	71.52
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	71.25	70.57
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	70.29	70.29
TraesCS3A01G153500.1	Wheat	peroxisome	70.93	69.81
KXG31500	Sorghum	cytosol	69.97	69.52
TraesCS4B01G324200.1	Wheat	peroxisome	68.37	67.72
GSMUA_Achr3P31530_001	Banana	cytosol	67.73	67.09
Os01t0228600-01	Rice	extracellular	66.77	66.14
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	66.77	66.14
Zm00001d030544_P001	Maize	cytosol, extracellular	62.3	60.94
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	71.57	46.09
VIT_02s0025g04730.t01	Wine grape	cytosol	44.41	43.85
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	40.26	43.45
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	45.69	31.02
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	29.39	23.83
VIT_18s0041g01830.t01	Wine grape	cytosol	23.96	21.87
VIT_14s0066g01320.t01	Wine grape	mitochondrion	22.36	18.28
VIT_18s0001g09890.t01	Wine grape	plastid	28.11	14.55
VIT_09s0018g01870.t01	Wine grape	plastid	27.8	13.94
VIT_03s0180g00130.t01	Wine grape	cytosol	28.11	13.48
TraesCS3D01G160900.1	Wheat	cytosol	7.67	12.9

Protein Annotations

EntrezGene:100251492	wikigene:100251492	Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A5CAL1	EMBL:AM488308
ProteinID:CAN84153	ProteinID:CAN84153.1	ProteinID:CCB59464	ProteinID:CCB59464.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1
InterPro:D-isomer_DH_NAD-bd	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287
GO:GO:0055114	EntrezGene:LOC100251492	wikigene:LOC100251492	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF180	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGR:TC59682
UniParc:UPI0001524F0F	ArrayExpress:VIT_09s0002g04300	EnsemblPlantsGene:VIT_09s0002g04300	EnsemblPlants:VIT_09s0002g04300.t01	unigene:Vvi.602	RefSeq:XP_002284500
RefSeq:XP_002284500.2	RefSeq:XP_003632860	RefSeq:XP_003632860.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:3943956..3947824

Molecular Weight (calculated)

34305.7 Da

IEP (calculated)

6.259

GRAVY (calculated)

0.041

Length

313 amino acids

Sequence
(BLAST)

001: MESIGVLLTC PMNPYLEQEL DKRFKLFRFW DFPSANDLFR EHSNSIRAVV GNSFIGADAQ MIEALPKMEI VSSFSVGLDK IDLVRCKEKG IRVTNTPDVL
101: TEDVADLALA LILATLRRIC ESDRYVRSGS WKKGDFKLTT KFTGKSVGII GLGRIGSAIA KRAEGFSCPI SYHSRTEKPG TNYKYYPSVV ELASNCQILV
201: VACALTPETR HIINREVINA LGPKGVVINI GRGLHVDEPE LVSALVEGRL GGAGLDVFEN EPNVPEELLA MDNVVLLPHV GSGTVETRKD MADLVLGNLE
301: AHFLNKPLLT PVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.