Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400019584 Potato cytosol 96.49 96.49
Solyc03g120670.2.1 Tomato cytosol, nucleus, plastid 84.34 84.34
CDX79406 Canola cytosol 75.08 75.08
Bra003537.1-P Field mustard cytosol 74.44 74.44
CDX67931 Canola cytosol 74.44 74.44
VIT_09s0002g04300.t01 Wine grape cytosol 74.12 74.12
AT1G79870.1 Thale cress cytosol 73.8 73.8
Bra035206.1-P Field mustard cytosol 72.84 73.55
CDX87280 Canola cytosol 72.84 73.55
CDY58781 Canola cytosol 72.84 72.84
Solyc12g044250.1.1 Tomato vacuole 72.52 72.06
KRH47286 Soybean nucleus 71.25 71.25
KRH44352 Soybean peroxisome 34.5 70.59
GSMUA_Achr3P03420_001 Banana cytosol 70.29 69.62
TraesCS3B01G180100.1 Wheat cytosol, golgi, unclear 69.01 68.35
TraesCS3A01G153500.1 Wheat peroxisome 69.01 67.92
KXG31500 Sorghum cytosol 67.41 66.98
TraesCS4B01G324200.1 Wheat peroxisome 66.77 66.14
TraesCS5A01G496700.1 Wheat cytosol, peroxisome, plastid 65.18 64.56
GSMUA_Achr3P31530_001 Banana cytosol 63.9 63.29
Os01t0228600-01 Rice extracellular 63.26 62.66
Solyc03g120680.2.1 Tomato nucleus 61.98 62.38
Solyc03g120660.2.1 Tomato cytosol 30.35 60.13
Zm00001d030544_P001 Maize cytosol, extracellular 60.06 58.75
Solyc08g080030.2.1 Tomato cytosol 39.94 46.3
HORVU3Hr1G031200.3 Barley cytosol, mitochondrion 69.33 44.65
Solyc01g093990.2.1 Tomato cytosol 42.17 40.87
Solyc11g020060.1.1 Tomato cytosol 24.6 27.4
Solyc01g111630.2.1 Tomato nucleus, plastid 28.75 23.32
Solyc03g044670.1.1 Tomato cytosol 17.25 22.5
Solyc02g086880.2.1 Tomato plastid 20.77 17.06
Solyc03g112070.2.1 Tomato plastid 25.56 13.33
Solyc10g049890.1.1 Tomato plastid 24.92 13.11
Solyc03g123830.2.1 Tomato plastid 26.2 13.08
TraesCS3D01G160900.1 Wheat cytosol 7.03 11.83
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1InterPro:D-isomer_2_OHA_DH_cat_domInterPro:D-isomer_DH_NAD-bdGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016616GO:GO:0016618
GO:GO:0030267GO:GO:0051287GO:GO:0055114UniProt:K4DFB4InterPro:NAD(P)-bd_dom_sfPFAM:PF00389
PFAM:PF02826PANTHER:PTHR10996PANTHER:PTHR10996:SF180SUPFAM:SSF51735SUPFAM:SSF52283EnsemblPlantsGene:Solyc12g044260.1
EnsemblPlants:Solyc12g044260.1.1UniParc:UPI00027695AFSEG:seg:::
Description
No Description!
Coordinates
chr12:+:38723933..38725115
Molecular Weight (calculated)
34277.4 Da
IEP (calculated)
4.887
GRAVY (calculated)
0.046
Length
313 amino acids
Sequence
(BLAST)
001: MESIGVLMAC PMSSYLEQQL DNRFNLIRYW NFSDKKQFIN DYAHSIRAVV GNAAAGADAE LIEALPQLEI VASFSVGLDK IDLNKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILAVLRRIC ESDRYVKKGL WKAGDFALTS KFSGKRVGII GLGRIGLAIA KRAEAFDCPI SYYARSEKTN TNYKYYPTVV ELATNCEILV
201: VACALTPETR YVVNREVIDA LGAKGILINI GRGPHVDEKE MVSSLLDGRL GGAGLDVFEN EPEVPDNLFG LENVVLLPHV ASGTEETRES MADIVIGNLE
301: AHFQNKPLLT PVV
Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Arabidopsis Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.