Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- vacuole 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400019584 | Potato | cytosol | 96.49 | 96.49 |
Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 84.34 | 84.34 |
CDX79406 | Canola | cytosol | 75.08 | 75.08 |
Bra003537.1-P | Field mustard | cytosol | 74.44 | 74.44 |
CDX67931 | Canola | cytosol | 74.44 | 74.44 |
VIT_09s0002g04300.t01 | Wine grape | cytosol | 74.12 | 74.12 |
AT1G79870.1 | Thale cress | cytosol | 73.8 | 73.8 |
Bra035206.1-P | Field mustard | cytosol | 72.84 | 73.55 |
CDX87280 | Canola | cytosol | 72.84 | 73.55 |
CDY58781 | Canola | cytosol | 72.84 | 72.84 |
Solyc12g044250.1.1 | Tomato | vacuole | 72.52 | 72.06 |
KRH47286 | Soybean | nucleus | 71.25 | 71.25 |
KRH44352 | Soybean | peroxisome | 34.5 | 70.59 |
GSMUA_Achr3P03420_001 | Banana | cytosol | 70.29 | 69.62 |
TraesCS3B01G180100.1 | Wheat | cytosol, golgi, unclear | 69.01 | 68.35 |
TraesCS3A01G153500.1 | Wheat | peroxisome | 69.01 | 67.92 |
KXG31500 | Sorghum | cytosol | 67.41 | 66.98 |
TraesCS4B01G324200.1 | Wheat | peroxisome | 66.77 | 66.14 |
TraesCS5A01G496700.1 | Wheat | cytosol, peroxisome, plastid | 65.18 | 64.56 |
GSMUA_Achr3P31530_001 | Banana | cytosol | 63.9 | 63.29 |
Os01t0228600-01 | Rice | extracellular | 63.26 | 62.66 |
Solyc03g120680.2.1 | Tomato | nucleus | 61.98 | 62.38 |
Solyc03g120660.2.1 | Tomato | cytosol | 30.35 | 60.13 |
Zm00001d030544_P001 | Maize | cytosol, extracellular | 60.06 | 58.75 |
Solyc08g080030.2.1 | Tomato | cytosol | 39.94 | 46.3 |
HORVU3Hr1G031200.3 | Barley | cytosol, mitochondrion | 69.33 | 44.65 |
Solyc01g093990.2.1 | Tomato | cytosol | 42.17 | 40.87 |
Solyc11g020060.1.1 | Tomato | cytosol | 24.6 | 27.4 |
Solyc01g111630.2.1 | Tomato | nucleus, plastid | 28.75 | 23.32 |
Solyc03g044670.1.1 | Tomato | cytosol | 17.25 | 22.5 |
Solyc02g086880.2.1 | Tomato | plastid | 20.77 | 17.06 |
Solyc03g112070.2.1 | Tomato | plastid | 25.56 | 13.33 |
Solyc10g049890.1.1 | Tomato | plastid | 24.92 | 13.11 |
Solyc03g123830.2.1 | Tomato | plastid | 26.2 | 13.08 |
TraesCS3D01G160900.1 | Wheat | cytosol | 7.03 | 11.83 |
Protein Annotations
Gene3D:3.40.50.720 | MapMan:50.1.1 | InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016616 | GO:GO:0016618 |
GO:GO:0030267 | GO:GO:0051287 | GO:GO:0055114 | UniProt:K4DFB4 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00389 |
PFAM:PF02826 | PANTHER:PTHR10996 | PANTHER:PTHR10996:SF180 | SUPFAM:SSF51735 | SUPFAM:SSF52283 | EnsemblPlantsGene:Solyc12g044260.1 |
EnsemblPlants:Solyc12g044260.1.1 | UniParc:UPI00027695AF | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr12:+:38723933..38725115
Molecular Weight (calculated)
34277.4 Da
IEP (calculated)
4.887
GRAVY (calculated)
0.046
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MESIGVLMAC PMSSYLEQQL DNRFNLIRYW NFSDKKQFIN DYAHSIRAVV GNAAAGADAE LIEALPQLEI VASFSVGLDK IDLNKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILAVLRRIC ESDRYVKKGL WKAGDFALTS KFSGKRVGII GLGRIGLAIA KRAEAFDCPI SYYARSEKTN TNYKYYPTVV ELATNCEILV
201: VACALTPETR YVVNREVIDA LGAKGILINI GRGPHVDEKE MVSSLLDGRL GGAGLDVFEN EPEVPDNLFG LENVVLLPHV ASGTEETRES MADIVIGNLE
301: AHFQNKPLLT PVV
101: TEDVADLAIG LILAVLRRIC ESDRYVKKGL WKAGDFALTS KFSGKRVGII GLGRIGLAIA KRAEAFDCPI SYYARSEKTN TNYKYYPTVV ELATNCEILV
201: VACALTPETR YVVNREVIDA LGAKGILINI GRGPHVDEKE MVSSLLDGRL GGAGLDVFEN EPEVPDNLFG LENVVLLPHV ASGTEETRES MADIVIGNLE
301: AHFQNKPLLT PVV
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Arabidopsis Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.