Factsheet for Bra003537.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67931	Canola	cytosol	99.04	99.04
AT1G79870.1	Thale cress	cytosol	86.9	86.9
Bra035206.1-P	Field mustard	cytosol	85.62	86.45
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	78.27	78.27
KRH47286	Soybean	nucleus	75.4	75.4
Solyc12g044260.1.1	Tomato	cytosol	74.44	74.44
VIT_09s0002g04300.t01	Wine grape	cytosol	74.12	74.12
KRH44352	Soybean	peroxisome	36.1	73.86
PGSC0003DMT400019584	Potato	cytosol	73.8	73.8
Solyc12g044250.1.1	Tomato	vacuole	72.2	71.75
PGSC0003DMT400019586	Potato	extracellular	69.97	69.52
GSMUA_Achr3P03420_001	Banana	cytosol	69.33	68.67
TraesCS3A01G153500.1	Wheat	peroxisome	68.69	67.61
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	68.05	67.41
TraesCS3D01G160800.1	Wheat	cytosol	68.37	67.3
Os01t0228600-01	Rice	extracellular	67.41	66.77
KXG31500	Sorghum	cytosol	66.77	66.35
TraesCS4B01G324200.1	Wheat	peroxisome	66.13	65.51
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	65.18	65.18
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	64.22	63.61
Solyc03g120680.2.1	Tomato	nucleus	62.3	62.7
KRH09880	Soybean	cytosol	60.38	62.38
GSMUA_Achr3P31530_001	Banana	cytosol	60.7	60.13
Zm00001d030544_P001	Maize	cytosol, extracellular	60.06	58.75
Bra035498.1-P	Field mustard	cytosol	16.29	52.04
Bra026966.1-P	Field mustard	cytosol	38.02	49.79
Bra019774.1-P	Field mustard	cytosol	50.8	46.09
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	68.37	44.03
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	42.49	33.5
Bra004275.1-P	Field mustard	cytosol	29.39	23.83
Bra004055.1-P	Field mustard	cytosol	29.39	23.83
Bra003888.1-P	Field mustard	mitochondrion	25.24	21.24
Bra008737.1-P	Field mustard	mitochondrion	24.6	20.05
Bra023487.1-P	Field mustard	mitochondrion	23.96	19.53
Bra016589.1-P	Field mustard	plastid	25.56	12.88
Bra017637.1-P	Field mustard	plastid	24.28	12.71
Bra034616.1-P	Field mustard	plastid	23.96	12.48
Bra001747.1-P	Field mustard	plastid	23.0	12.27
Bra011506.1-P	Field mustard	plastid	23.96	12.08
TraesCS3D01G160900.1	Wheat	cytosol	6.71	11.29
Bra034615.1-P	Field mustard	cytosol	1.6	2.92

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra003537	EnsemblPlants:Bra003537.1	EnsemblPlants:Bra003537.1-P	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
UniProt:M4CH54	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996
PANTHER:PTHR10996:SF139	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI00025419C8	SEG:seg	:

Description

AT1G79870 (E=1e-140) | oxidoreductase family protein

Coordinates

chrA07:+:13681781..13683155

Molecular Weight (calculated)

34406.9 Da

IEP (calculated)

6.623

GRAVY (calculated)

-0.005

Length

313 amino acids

Sequence
(BLAST)

001: MESIGVLMMC PMNSYLENEL QKRYNLHRFW TCPEKSVFLE THRSSIRAIV GNASVGADAK LIDDLPKLEI ISSFSVGVDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKYGDFQLTT KFSGKSVGII GLGRIGAAIA KRAQGFNCPI NYYSRTEKPD VGYKYYPTVV ELAQNSDILV
201: VACALTDETR HIVNREVMDA LGAKGVLINI GRGPHIDEKE MVKALTEGRL GGAGLDVFEQ EPHVPEELFG LENVVLLPHV ASATVETRTA MADLVMGNLD
301: AHFAGKPLLT RVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.