Factsheet for Bra004275.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004055.1-P	Field mustard	cytosol	98.45	98.45
AT1G68010.2	Thale cress	cytosol	96.63	96.38
Solyc01g111630.2.1	Tomato	nucleus, plastid	90.93	90.93
PGSC0003DMT400015828	Potato	cytosol	90.41	90.41
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	89.38	89.38
KRG90684	Soybean	nucleus	87.31	87.31
KRH36064	Soybean	nucleus	86.79	86.79
TraesCS6D01G001700.1	Wheat	golgi, plastid	85.23	85.23
TraesCS6B01G004400.1	Wheat	peroxisome	85.23	85.23
TraesCS6A01G000400.1	Wheat	peroxisome	84.97	84.97
Os02t0101500-02	Rice	extracellular, mitochondrion	84.72	84.72
GSMUA_Achr5P18940_001	Banana	cytosol	34.2	84.08
KXG29243	Sorghum	cytosol	82.12	83.2
HORVU6Hr1G017010.1	Barley	cytosol	22.8	82.24
GSMUA_Achr5P18950_001	Banana	cytosol	47.67	81.78
TraesCS5B01G226200.1	Wheat	cytosol	24.35	69.63
HORVU6Hr1G000640.1	Barley	cytosol	54.15	68.98
Zm00001d014919_P002	Maize	mitochondrion	74.35	66.44
HORVU6Hr1G000650.2	Barley	peroxisome	32.9	65.8
CDY01876	Canola	endoplasmic reticulum, plasma membrane	99.48	55.41
Bra003537.1-P	Field mustard	cytosol	23.83	29.39
Bra035206.1-P	Field mustard	cytosol	23.06	28.71
Bra035498.1-P	Field mustard	cytosol	7.25	28.57
Bra019774.1-P	Field mustard	cytosol	22.28	24.93
Bra026966.1-P	Field mustard	cytosol	14.77	23.85
Bra003888.1-P	Field mustard	mitochondrion	19.43	20.16
Bra023487.1-P	Field mustard	mitochondrion	19.17	19.27
Bra008737.1-P	Field mustard	mitochondrion	18.91	19.01
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	18.91	18.39
Bra001747.1-P	Field mustard	plastid	26.42	17.38
Bra017637.1-P	Field mustard	plastid	25.13	16.22
Bra034616.1-P	Field mustard	plastid	25.13	16.14
Bra016589.1-P	Field mustard	plastid	25.91	16.1
Bra011506.1-P	Field mustard	plastid	25.39	15.78
Bra034615.1-P	Field mustard	cytosol	2.59	5.85

Protein Annotations

MapMan:1.3.6	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra004275	EnsemblPlants:Bra004275.1	EnsemblPlants:Bra004275.1-P	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
UniProt:M4CJ91	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996
PANTHER:PTHR10996:SF137	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI00025416D6	SEG:seg	:

Description

AT1G68010 (E=9e-208) HPR | HPR; glycerate dehydrogenase/ poly(U) binding

Coordinates

chrA07:+:17741627..17744107

Molecular Weight (calculated)

42253.4 Da

IEP (calculated)

8.291

GRAVY (calculated)

-0.026

Length

386 amino acids

Sequence
(BLAST)

001: MAKPVAIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIINLIG NRCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADGFMRAGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEE ALVNHLRENP MFRVGLDVFE
301: EEPFMKPGLA DMKNAIVVPH IASASKWTRE GMATLAALNV VGRIKGYPIW SDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Best Arabidopsis Sequence Match ( AT1G68010.1 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.