Factsheet for GSMUA_Achr5P18940_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G017010.1	Barley	cytosol	57.96	85.05
TraesCS5B01G226200.1	Wheat	cytosol	61.78	71.85
HORVU6Hr1G000650.2	Barley	peroxisome	84.71	68.91
TraesCS6A01G000400.1	Wheat	peroxisome	89.17	36.27
TraesCS6B01G004400.1	Wheat	peroxisome	89.17	36.27
TraesCS6D01G001700.1	Wheat	golgi, plastid	89.17	36.27
Os02t0101500-02	Rice	extracellular, mitochondrion	88.53	36.01
KXG29243	Sorghum	cytosol	85.99	35.43
Solyc01g111630.2.1	Tomato	nucleus, plastid	86.62	35.23
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	85.99	34.97
AT1G68010.2	Thale cress	cytosol	85.99	34.88
KRG90684	Soybean	nucleus	85.35	34.72
CDY07405	Canola	cytosol	84.71	34.46
KRH36064	Soybean	nucleus	84.71	34.46
Bra004055.1-P	Field mustard	cytosol	84.71	34.46
PGSC0003DMT400015828	Potato	cytosol	84.08	34.2
Bra004275.1-P	Field mustard	cytosol	84.08	34.2
CDY04198	Canola	cytosol	81.53	32.49
GSMUA_Achr4P17980_001	Banana	cytosol	21.66	31.78
CDX96054	Canola	mitochondrion	84.71	29.04
Zm00001d014919_P002	Maize	mitochondrion	74.52	27.08
CDY01876	Canola	endoplasmic reticulum, plasma membrane	84.08	19.05
GSMUA_Achr3P03420_001	Banana	cytosol	28.66	14.24
GSMUA_Achr3P31530_001	Banana	cytosol	26.75	13.29
GSMUA_Achr5P14420_001	Banana	cytosol	25.48	12.12
GSMUA_Achr5P14430_001	Banana	mitochondrion	19.75	10.2
GSMUA_Achr3P21910_001	Banana	cytosol	20.38	9.38
GSMUA_Achr3P01200_001	Banana	mitochondrion	19.75	8.09
GSMUA_Achr3P27990_001	Banana	plastid	31.21	7.97
GSMUA_Achr4P04100_001	Banana	plastid	28.66	7.76
GSMUA_Achr9P22790_001	Banana	plastid	25.48	7.62
GSMUA_Achr4P11440_001	Banana	plastid	27.39	7.56
GSMUA_Achr10P...	Banana	plastid	29.3	7.47
HORVU6Hr1G000640.1	Barley	cytosol	6.37	3.3
GSMUA_Achr5P18950_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr5P18940_001	EnsemblPlants:GSMUA_Achr5T18940_001	EnsemblPlantsGene:GSMUA_Achr5G18940_001	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10996	PANTHER:PTHR10996:SF137	PFAM:PF02826	SUPFAM:SSF51735	UniParc:UPI000296170C
UniProt:M0SZS3	MapMan:35.1	:	:	:	:

Description

Glycerate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G18940_001]

Coordinates

chr5:-:20431725..20433106

Molecular Weight (calculated)

17118.8 Da

IEP (calculated)

6.113

GRAVY (calculated)

-0.056

Length

157 amino acids

Sequence
(BLAST)

001: MEEVLREADV ISLHPVLDKT TYHLVNKESL AIMKKEAILV NASRGPVIDE AALVEHLKAN PMFRVGLDVF EDEPFMKPGL AEQKNAVVVP HIASASKWTR
101: EGMATLAALN VLGKIKGYPI WGDPNRVEPF LDENSPAPTA CPSIVNAKQL GLPSSKL

Best Arabidopsis Sequence Match ( AT1G68010.1 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.