Factsheet for GSMUA_Achr3P21910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0263400-00	Rice	cytosol	56.6	67.96
Solyc11g020060.1.1	Tomato	cytosol	54.55	66.19
VIT_18s0041g01830.t01	Wine grape	cytosol	65.98	65.6
PGSC0003DMT400071027	Potato	cytosol	58.94	65.26
Os07t0264100-01	Rice	mitochondrion	71.26	64.97
EER96197	Sorghum	mitochondrion	71.85	63.64
KXG34859	Sorghum	mitochondrion, plastid	70.67	62.76
TraesCS5A01G161300.1	Wheat	plastid	68.92	62.17
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	68.62	61.9
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	68.33	61.64
Zm00001d005489_P006	Maize	mitochondrion	70.67	61.64
TraesCS7B01G373500.1	Wheat	cytosol	18.77	61.54
PGSC0003DMT400085920	Potato	mitochondrion	31.96	59.24
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	68.04	58.29
AT1G72190.1	Thale cress	mitochondrion	62.17	56.84
CDY50445	Canola	mitochondrion	61.29	56.03
CDX68275	Canola	mitochondrion	60.41	55.38
Bra003888.1-P	Field mustard	mitochondrion	60.12	55.11
KRH62463	Soybean	mitochondrion	62.76	54.73
Solyc03g044670.1.1	Tomato	cytosol	36.95	52.5
GSMUA_Achr4P17980_001	Banana	cytosol	7.92	25.23
GSMUA_Achr3P03420_001	Banana	cytosol	23.17	25.0
GSMUA_Achr3P31530_001	Banana	cytosol	21.41	23.1
GSMUA_Achr5P14420_001	Banana	cytosol	21.7	22.42
GSMUA_Achr3P01200_001	Banana	mitochondrion	24.93	22.19
GSMUA_Achr5P14430_001	Banana	mitochondrion	19.35	21.71
GSMUA_Achr5P18940_001	Banana	cytosol	9.38	20.38
GSMUA_Achr5P18950_001	Banana	cytosol	10.85	16.44
GSMUA_Achr9P22790_001	Banana	plastid	25.22	16.38
GSMUA_Achr4P11440_001	Banana	plastid	26.39	15.82
GSMUA_Achr4P04100_001	Banana	plastid	25.81	15.17
GSMUA_Achr3P27990_001	Banana	plastid	26.98	14.96
GSMUA_Achr10P...	Banana	plastid	26.69	14.77

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G21910_001	EnsemblPlants:GSMUA_Achr3P21910_001	EnsemblPlants:GSMUA_Achr3T21910_001
UniProt:M0SGQ7	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938
PANTHER:PTHR42938:SF2	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0002963438	:	:

Description

erythronate-4-phosphate dehydrogenase domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G21910_001]

Coordinates

chr3:-:22858972..22866149

Molecular Weight (calculated)

36929.9 Da

IEP (calculated)

7.290

GRAVY (calculated)

0.085

Length

341 amino acids

Sequence
(BLAST)

001: MGDGVEKSHN DITNVLFCGF HFPASQNYTR EYLKGYPFIK VDEVPLDEVP NVIHRYHICV VKNRRFDATV IDKAVQMKLL MQFGVGLEGV DIEAATRCNI
101: KVARIPGSST GNAASCAEMA IYLILGLLRK QKEMDNAVKL KNLGVPVGET LLGKTVFILG FGAIGVDLAK RLRPFGVKIL ATKRNWTSVS LPPNGAPNDE
201: IDHLVDKKGG PENLYEFAGE ADIVVTCLAL NAATAGIVNG RFLSSMRKGS LLVNIARGGL LDYNAVHQHL QSGHLGGLAI DVAWTEPFDP EDPILKFPNV
301: LITPHVAGVT EYSYRTMAKV VGDCALQLHA GSPLTGVEIV N

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.