Factsheet for Os07t0264100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

plastid: 17189339
mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0263400-00	Rice	cytosol	65.24	85.92
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	79.41	78.57
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	79.41	78.57
TraesCS5A01G161300.1	Wheat	plastid	79.14	78.31
KXG34859	Sorghum	mitochondrion, plastid	77.54	75.52
TraesCS7B01G373500.1	Wheat	cytosol	20.86	75.0
Zm00001d005489_P006	Maize	mitochondrion	77.81	74.42
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	78.88	74.12
GSMUA_Achr3P21910_001	Banana	cytosol	64.97	71.26
VIT_18s0041g01830.t01	Wine grape	cytosol	56.68	61.81
Solyc11g020060.1.1	Tomato	cytosol	45.99	61.21
PGSC0003DMT400071027	Potato	cytosol	50.0	60.71
PGSC0003DMT400085920	Potato	mitochondrion	28.07	57.07
AT1G72190.1	Thale cress	mitochondrion	54.01	54.16
CDY50445	Canola	mitochondrion	53.74	53.89
Bra003888.1-P	Field mustard	mitochondrion	53.48	53.76
CDX68275	Canola	mitochondrion	53.48	53.76
KRH62463	Soybean	mitochondrion	55.08	52.69
Solyc03g044670.1.1	Tomato	cytosol	30.48	47.5
Os11t0229100-01	Rice	extracellular	8.82	23.74
Os04t0107500-01	Rice	plasma membrane	20.05	23.73
Os04t0107200-01	Rice	mitochondrion	20.86	23.71
Os04t0107300-01	Rice	mitochondrion, plasma membrane	20.05	23.01
Os01t0228600-01	Rice	extracellular	19.25	22.78
Os06t0486900-01	Rice	mitochondrion	22.19	21.96
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	19.25	21.88
Os06t0486800-01	Rice	mitochondrion	21.93	21.81
Os02t0101500-02	Rice	extracellular, mitochondrion	19.25	18.65
Os04t0650800-01	Rice	plastid	26.47	16.15
Os06t0655100-00	Rice	plastid	24.87	14.69
Os08t0447000-01	Rice	plastid	23.26	14.01

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:4342880	EMBL:AK065209	EMBL:AK104560	EMBL:AK104725
ProteinID:BAF21244.1	ProteinID:BAT00908.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_NAD-bd	ProteinID:EEE66922.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os07g0264100
EnsemblPlants:Os07t0264100-01	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF2
UniProt:Q0D7C9	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0000E12A73	RefSeq:XP_015644908.1	SEG:seg

Description

NAD(P)-binding domain containing protein. (Os07t0264100-01)

Coordinates

chr7:+:9353167..9357704

Molecular Weight (calculated)

40518.0 Da

IEP (calculated)

7.164

GRAVY (calculated)

0.059

Length

374 amino acids

Sequence
(BLAST)

001: MAAAARLVST TLARSSSSLA AAARRPDLLA SSPRGFSSMA DSIQRSGSGD ITRVLFCGPY WPASTSFTKE YLQSYPFIQV DEVGLEEVPD VIQNYHLCVV
101: KNRRLDSDTI AKASQMKIIM QYGVGLEGVD VNAATEHKIK VARIPGSTTG NAVSCAEMAI YLTLGVLRKQ KVMDTAVKRK DLGIPVGDTI FGKSVLILGF
201: GAIGVEIAKR LRPFGVKILA TKRNWSSDTL PCDIDELVDK KGGPEDMYEF AGEADIVITC LLLTNETVGI VDHKFLSAMK KGSYLVNIAR GRLLDYDAVF
301: NHLKSGHLGG LGIDVAWTEP YDPEDPILKF SNVIITPHIA GVTEYSYRTM AKVVGGVALK LHSGEPITEV EFVN

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.