Factsheet for TraesCS7B01G373500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	91.35	25.13
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	91.35	25.13
Os07t0263400-00	Rice	cytosol	65.38	23.94
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	90.38	23.62
Os07t0264100-01	Rice	mitochondrion	75.0	20.86
Solyc03g044670.1.1	Tomato	cytosol	47.12	20.42
KXG34859	Sorghum	mitochondrion, plastid	74.04	20.05
Zm00001d005489_P006	Maize	mitochondrion	72.12	19.18
GSMUA_Achr3P21910_001	Banana	cytosol	61.54	18.77
Solyc11g020060.1.1	Tomato	cytosol	47.12	17.44
PGSC0003DMT400085920	Potato	mitochondrion	28.85	16.3
VIT_18s0041g01830.t01	Wine grape	cytosol	52.88	16.04
PGSC0003DMT400071027	Potato	cytosol	46.15	15.58
KRH62463	Soybean	mitochondrion	53.85	14.32
AT1G72190.1	Thale cress	mitochondrion	45.19	12.6
Bra003888.1-P	Field mustard	mitochondrion	44.23	12.37
CDX68275	Canola	mitochondrion	44.23	12.37
CDY50445	Canola	mitochondrion	44.23	12.33
TraesCS2B01G048100.1	Wheat	plastid	25.0	7.56
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	22.12	7.28
TraesCS7B01G456600.1	Wheat	cytosol, plastid	24.04	7.27
TraesCS2B01G048500.1	Wheat	cytosol	23.08	7.12
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	22.12	7.12
TraesCS2B01G048000.1	Wheat	mitochondrion	22.12	7.1
TraesCS4B01G324200.1	Wheat	peroxisome	20.19	6.65
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	20.19	6.65
TraesCS6B01G302400.2	Wheat	mitochondrion	24.04	6.63
TraesCS4B01G066400.1	Wheat	mitochondrion	20.19	5.92
TraesCS6B01G004400.1	Wheat	peroxisome	21.15	5.7
TraesCS7B01G130600.1	Wheat	mitochondrion	20.19	5.57
TraesCS5B01G226200.1	Wheat	cytosol	5.77	4.44
TraesCS1B01G234300.2	Wheat	plastid	23.08	3.88
TraesCS7B01G400800.1	Wheat	plastid	22.12	3.76

Protein Annotations

EnsemblPlants:TraesCS7B01G373500.1	EnsemblPlantsGene:TraesCS7B01G373500	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR42938	PANTHER:PTHR42938:SF2	PFAM:PF02826	SUPFAM:SSF51735	TMHMM:TMhelix	MapMan:35.2

Description

No Description!

Coordinates

chr7B:-:639267632..639268187

Molecular Weight (calculated)

11285.8 Da

IEP (calculated)

4.757

GRAVY (calculated)

0.174

Length

104 amino acids

Sequence
(BLAST)

001: MDTAVIQKDL GLPVGETIFG KTILIMGFGA IGMEIAKRLR PFGVKILATK RNWSSNTVSC DLDGLVDKKG GPEDMYELAR EADIVITCMT LNNESVNSSL
101: CSFI

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.