Factsheet for Os04t0107500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G030900.1	Wheat	cytosol	73.73	73.73
Zm00001d018790_P001	Maize	extracellular, plasma membrane	72.47	73.16
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	71.84	71.84
OQU81061	Sorghum	plastid	71.52	70.85
OQU88433	Sorghum	cytosol	71.84	70.72
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	70.25	70.25
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	74.05	69.85
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	69.3	68.65
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	68.35	60.5
Bra035498.1-P	Field mustard	cytosol	17.72	57.14
CDY54697	Canola	mitochondrion	26.58	56.76
CDY17092	Canola	cytosol	18.67	55.66
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	57.59	55.32
GSMUA_Achr4P17980_001	Banana	cytosol	18.35	54.21
PGSC0003DMT400058518	Potato	cytosol	23.73	53.96
Solyc08g080030.2.1	Tomato	cytosol	45.57	53.33
Os04t0107200-01	Rice	mitochondrion	54.43	52.28
GSMUA_Achr5P14420_001	Banana	cytosol	53.48	51.21
Bra026966.1-P	Field mustard	cytosol	38.61	51.05
CDY57070	Canola	cytosol	51.9	50.93
CDY26572	Canola	cytosol	38.61	50.62
GSMUA_Achr5P14430_001	Banana	mitochondrion	48.42	50.33
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	45.57	49.66
Os04t0107300-01	Rice	mitochondrion, plasma membrane	50.63	49.08
Bra019774.1-P	Field mustard	cytosol	53.16	48.7
CDX98054	Canola	cytosol	53.16	48.7
Os01t0228600-01	Rice	extracellular	48.42	48.42
CDY16011	Canola	cytosol, peroxisome, plastid	45.25	48.31
PGSC0003DMT400058520	Potato	cytosol	49.37	48.0
VIT_02s0025g04730.t01	Wine grape	cytosol	47.47	47.32
KRH48312	Soybean	cytosol	49.37	46.29
AT2G45630.2	Thale cress	plastid	48.73	45.56
KRH48313	Soybean	cytosol	48.42	45.54
Os11t0229100-01	Rice	extracellular	19.94	45.32
KRH48311	Soybean	cytosol	47.78	45.21
CDY26571	Canola	plastid	41.46	44.26
Solyc01g093990.2.1	Tomato	cytosol	44.3	43.34
CDY16012	Canola	cytosol, nucleus, peroxisome	32.91	43.15
KRH48310	Soybean	cytosol	44.62	42.22
KRH65201	Soybean	plastid	36.08	39.72
KRH65202	Soybean	cytosol	28.16	39.56
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	51.9	35.57
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	43.35	34.51
CDY16010	Canola	cytosol, nucleus, plastid	52.22	29.95
CDY26570	Canola	cytosol	37.66	26.44
Os07t0263400-00	Rice	cytosol	19.62	21.83
Os06t0486900-01	Rice	mitochondrion	25.0	20.9
Os06t0486800-01	Rice	mitochondrion	24.05	20.21
Os07t0264100-01	Rice	mitochondrion	23.73	20.05
Os02t0101500-02	Rice	extracellular, mitochondrion	23.42	19.17
Os04t0650800-01	Rice	plastid	27.22	14.03
Os06t0655100-00	Rice	plastid	27.22	13.59
Os08t0447000-01	Rice	plastid	24.68	12.56

Protein Annotations

Gene3D:3.40.50.720	EntrezGene:4334916	MapMan:50.1.1	EMBL:AK067010	ProteinID:BAF13931.1	ProteinID:BAS87546.1
ProteinID:CAE02766.2	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0009853	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616
GO:GO:0016618	GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os04g0107500
EnsemblPlants:Os04t0107500-01	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF147	UniProt:Q7XRA2
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000021C70E	RefSeq:XP_015633473.1	SEG:seg	:

Description

NAD(P)-binding domain containing protein. (Os04t0107500-01);NAD(P)-binding domain containing protein. (Os04t0107500-02)

Coordinates

chr4:+:453595..457102

Molecular Weight (calculated)

33326.4 Da

IEP (calculated)

5.085

GRAVY (calculated)

0.268

Length

316 amino acids

Sequence
(BLAST)

001: MVAPSPDAGK PLVILLRPLY PEFAAALDGR FRFVLAADAD EGNAAEARAV LVPALTPVSA DLVARLPKLE IVVATSTGVD HIDLDACRRR GISVTNAGEV
101: FAPDVADYAV GLVVAVLRRV AAAEAYLRRG RWAADGDYPL ATKVSGKRVG IVGLGSIGGL VARRLAAFGC VIAYNSRSPK ASAPYKFYPS VRELAAESDV
201: LVLSCALTEE TRRMVGREVM EALGKGGVLV NVGRGGLVDE AELVRCLREG VLGGAGLDVY ENEPEVPPEL WGMDNVVLSD HRAVITPESI QGVVDVVKAN
301: LDAFFSGKPL VSQVQL

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.